Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AL021331.1-201ENST00000402817 582 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AL390774.1-201ENST00000411924 246 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 DPRXP1-201ENST00000426312 460 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 OR2B8P-201ENST00000432841 938 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 RPL21P33-201ENST00000444831 484 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AL096803.2-201ENST00000450032 677 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 RN7SL325P-201ENST00000460434 283 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC063955.1-201ENST00000462872 685 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AP002371.1-201ENST00000463604 433 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 RPS12P31-201ENST00000491419 398 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC112225.1-201ENST00000508230 297 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC107980.1-201ENST00000558671 3355 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC078795.3-201ENST00000602913 472 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC092032.1-201ENST00000603090 165 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC019257.2-201ENST00000605539 497 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC072039.2-201ENST00000608883 439 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC138749.5-201ENST00000611461 208 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC245407.2-201ENST00000614199 451 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC126177.8-201ENST00000618339 1015 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC104985.2-201ENST00000620598 500 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC079248.2-201ENST00000623779 326 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AL590396.3-201ENST00000636334 300 ntBASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.48□□□□□ -1.21
RNF43Q68DV7 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RNF43Q68DV7 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF43Q68DV7 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF43Q68DV7 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF43Q68DV7 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF43Q68DV7 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF43Q68DV7 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RNF43Q68DV7 RPL24P4-201ENST00000326586 421 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 MIR191-201ENST00000384873 92 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 MTND1P21-201ENST00000412991 285 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 CDK8P2-201ENST00000415020 547 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 RPL36P18-201ENST00000419316 318 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 EEF1GP7-201ENST00000422983 703 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AL596276.1-201ENST00000434465 418 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 AC091862.1-201ENST00000438016 1100 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 AC064862.5-201ENST00000440618 334 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 PTENP1-201ENST00000447117 1215 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 CYCSP44-201ENST00000448560 313 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 RHEBP2-201ENST00000450289 600 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 AC022080.2-201ENST00000452932 533 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 SYPL1P1-201ENST00000473622 768 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 RN7SL790P-201ENST00000474043 298 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 SNX18P25-201ENST00000510539 758 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AC092593.2-201ENST00000513866 913 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 RNU6-232P-201ENST00000517144 64 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AC024405.1-201ENST00000532521 1042 ntBASIC7.47□□□□□ -1.21
RNF43Q68DV7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.47□□□□□ -1.21
RNF43Q68DV7 AC126177.6-201ENST00000550420 1009 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms