Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC037479.1-201ENST00000558361 625 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 NMNAT1P5-201ENST00000559657 841 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 RBM22P1-201ENST00000578589 1214 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 MIR4732-201ENST00000581873 76 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AL583832.1-201ENST00000603227 784 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC005858.3-201ENST00000624756 589 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC068213.1-201ENST00000625124 226 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AL355480.1-201ENST00000629041 99 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 AC016251.1-201ENST00000624299 4198 ntBASIC9.01□□□□□ -0.97
RC3H1Q5TC82 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
RC3H1Q5TC82 MTND5P23-201ENST00000430812 1655 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9□□□□□ -0.97
RC3H1Q5TC82 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 RNA5SP85-201ENST00000365378 119 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 LARP1P1-201ENST00000407692 292 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 METTL5-204ENST00000409340 472 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 RN7SKP33-201ENST00000410942 340 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 ZDHHC20P2-201ENST00000424108 429 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 NAP1L4P2-201ENST00000425958 899 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 ISCA1P1-201ENST00000426679 387 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 YWHAZP7-201ENST00000436906 631 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC9□□□□□ -0.97
RC3H1Q5TC82 CASP3P1-201ENST00000446037 609 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AC118758.1-202ENST00000454719 225 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 DAP3-209ENST00000465375 729 ntTSL 2 BASIC9□□□□□ -0.97
RC3H1Q5TC82 RPL23AP8-201ENST00000479812 475 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 DEFB109A-201ENST00000482450 265 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 RN7SL170P-201ENST00000487098 295 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC9□□□□□ -0.97
RC3H1Q5TC82 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC004069.2-201ENST00000505438 1114 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 HMGB3P13-201ENST00000511263 607 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC9□□□□□ -0.97
RC3H1Q5TC82 RNU6-507P-201ENST00000516045 100 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 RNU6-718P-201ENST00000516166 105 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 IGKV3D-31-201ENST00000519131 281 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 MED28P5-201ENST00000528254 438 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 RGS5-220ENST00000528689 566 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC9□□□□□ -0.97
RC3H1Q5TC82 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC124891.1-201ENST00000536322 519 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC9□□□□□ -0.97
RC3H1Q5TC82 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 PPIAP6-201ENST00000557078 499 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC087465.1-201ENST00000560574 245 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 MT1B-202ENST00000562399 351 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC9□□□□□ -0.97
RC3H1Q5TC82 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 AC119501.1-201ENST00000603646 475 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AP000907.4-201ENST00000604143 237 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AC128687.1-201ENST00000605304 619 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AL445423.1-201ENST00000609941 536 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AC068726.1-201ENST00000610993 341 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 AC004223.4-201ENST00000612426 332 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 U4.5-201ENST00000617137 123 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC9□□□□□ -0.97
RC3H1Q5TC82 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC9□□□□□ -0.97
RC3H1Q5TC82 HSPD1P9-201ENST00000420325 1636 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
RC3H1Q5TC82 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 KYNUP3-201ENST00000574386 1341 ntBASIC9□□□□□ -0.97
RC3H1Q5TC82 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
RC3H1Q5TC82 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
RC3H1Q5TC82 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms