Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RAB28P2-201ENST00000454299 641 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 RN7SL643P-201ENST00000471845 291 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 RPS7P11-201ENST00000484240 586 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 MTCO1P55-201ENST00000489829 745 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 GM2AP2-201ENST00000491764 562 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 SUMO2P4-201ENST00000504193 276 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 SNORA74.4-201ENST00000607595 199 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AC022164.1-201ENST00000568767 2673 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 AL359091.1-201ENST00000449048 1734 ntBASIC4.66□□□□□ -1.66
HIST1H1AQ02539 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HIST1H1AQ02539 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HIST1H1AQ02539 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HIST1H1AQ02539 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HIST1H1AQ02539 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HIST1H1AQ02539 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.65□□□□□ -1.66
HIST1H1AQ02539 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HIST1H1AQ02539 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HIST1H1AQ02539 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 YWHAZP4-201ENST00000392459 708 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC003045.1-201ENST00000398779 713 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AL158827.1-201ENST00000416300 391 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AL121878.1-201ENST00000418638 859 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC002127.1-201ENST00000421305 225 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 FTLP19-201ENST00000433300 394 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 RPEP4-201ENST00000437636 602 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AL031681.1-201ENST00000443304 400 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 MORF4-201ENST00000447135 971 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 OSTCP1-201ENST00000455507 450 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC073594.1-201ENST00000462065 364 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 RN7SL39P-201ENST00000462264 297 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AP003385.3-201ENST00000472498 287 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC008945.1-201ENST00000505144 499 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC093816.1-201ENST00000515076 913 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 RNA5SP96-201ENST00000516041 107 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 CYCSP25-201ENST00000525280 316 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC135983.3-201ENST00000528049 1226 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC090286.3-201ENST00000573133 187 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC027216.1-201ENST00000577726 685 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 RN7SL475P-201ENST00000583379 298 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 DYNLL1P1-201ENST00000595442 269 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC138907.8-201ENST00000623981 2256 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
HIST1H1AQ02539 AC027279.4-201ENST00000624371 2072 ntBASIC4.65□□□□□ -1.67
HIST1H1AQ02539 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC217777.1-201ENST00000570034 1471 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 AC079248.1-201ENST00000427568 1546 ntBASIC4.64□□□□□ -1.67
HIST1H1AQ02539 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HIST1H1AQ02539 SNORA43.1-201ENST00000364863 140 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms