Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
H3F3AP84243 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3F3AP84243 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3F3AP84243 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3F3AP84243 AC010401.2-201ENST00000575137 4934 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H3F3AP84243 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
H3F3AP84243 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
H3F3AP84243 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3F3AP84243 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3F3AP84243 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3F3AP84243 MTCO1P28-201ENST00000574177 1528 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3F3AP84243 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.4□□□□□ -1.54
H3F3AP84243 MYL6P5-201ENST00000412707 459 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3F3AP84243 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.4□□□□□ -1.54
H3F3AP84243 AL731534.1-201ENST00000434711 269 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 AC019084.1-201ENST00000457337 432 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 AC092865.4-201ENST00000477936 615 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 RN7SL741P-201ENST00000482473 289 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 LSM3P4-201ENST00000502948 309 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 CCDC11P1-201ENST00000503137 1162 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.4□□□□□ -1.54
H3F3AP84243 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.4□□□□□ -1.54
H3F3AP84243 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.4□□□□□ -1.54
H3F3AP84243 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.4□□□□□ -1.54
H3F3AP84243 AC110056.1-201ENST00000525759 911 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.4□□□□□ -1.54
H3F3AP84243 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.4□□□□□ -1.54
H3F3AP84243 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.4□□□□□ -1.54
H3F3AP84243 AC002310.3-201ENST00000569728 723 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 MIR4271-201ENST00000582451 67 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.4□□□□□ -1.54
H3F3AP84243 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.4□□□□□ -1.54
H3F3AP84243 AC073333.2-201ENST00000603589 769 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 AC004801.6-201ENST00000616571 978 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 AL157762.1-201ENST00000619612 415 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 AC073593.1-201ENST00000624500 411 ntBASIC5.4□□□□□ -1.54
H3F3AP84243 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3F3AP84243 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.4□□□□□ -1.55
H3F3AP84243 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.4□□□□□ -1.55
H3F3AP84243 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3F3AP84243 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3F3AP84243 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3F3AP84243 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.4□□□□□ -1.55
H3F3AP84243 AC008627.1-201ENST00000517511 1704 ntBASIC5.4□□□□□ -1.55
H3F3AP84243 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3F3AP84243 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3F3AP84243 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3F3AP84243 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3F3AP84243 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.39□□□□□ -1.55
H3F3AP84243 MIR130B-202ENST00000385018 82 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
H3F3AP84243 RPL35AP3-201ENST00000414680 288 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.39□□□□□ -1.55
H3F3AP84243 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.39□□□□□ -1.55
H3F3AP84243 AL445466.1-201ENST00000448432 357 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 AL162739.1-201ENST00000450606 307 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 CFL1P4-201ENST00000451536 498 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 AL445687.2-201ENST00000458156 728 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 AC083795.1-201ENST00000491760 320 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.39□□□□□ -1.55
H3F3AP84243 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.39□□□□□ -1.55
H3F3AP84243 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3F3AP84243 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.39□□□□□ -1.55
H3F3AP84243 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.39□□□□□ -1.55
H3F3AP84243 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.39□□□□□ -1.55
H3F3AP84243 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.39□□□□□ -1.55
H3F3AP84243 AL049779.3-201ENST00000557141 606 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 DPPA3P2-202ENST00000557188 1219 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.39□□□□□ -1.55
H3F3AP84243 AP005119.1-201ENST00000580956 292 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 AC091167.5-201ENST00000605689 894 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.39□□□□□ -1.55
H3F3AP84243 OR8A1-204ENST00000642111 1145 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.39□□□□□ -1.55
H3F3AP84243 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H3F3AP84243 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 GNL2P1-201ENST00000451274 2190 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3F3AP84243 NCOA4P2-201ENST00000340589 1813 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 RBPJP7-201ENST00000442803 1447 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 RBPJP5-201ENST00000449433 1447 ntBASIC5.39□□□□□ -1.55
H3F3AP84243 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.39□□□□□ -1.55
H3F3AP84243 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
H3F3AP84243 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.38□□□□□ -1.55
H3F3AP84243 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms