Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 AC005225.5-201ENST00000623547 2225 ntBASIC5.95□□□□□ -1.46
RAE1P78406 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.95□□□□□ -1.46
RAE1P78406 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.95□□□□□ -1.46
RAE1P78406 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RAE1P78406 CDY11P-201ENST00000447168 1651 ntBASIC5.94□□□□□ -1.46
RAE1P78406 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 AC009501.3-201ENST00000605001 1352 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC034229.2-201ENST00000566945 2508 ntBASIC5.94□□□□□ -1.46
RAE1P78406 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RAE1P78406 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
RAE1P78406 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.94□□□□□ -1.46
RAE1P78406 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.94□□□□□ -1.46
RAE1P78406 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RAE1P78406 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.94□□□□□ -1.46
RAE1P78406 AC017035.1-201ENST00000411999 1115 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 MORF4L1P7-201ENST00000426038 703 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AL354707.3-201ENST00000427308 331 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 BMP6P1-201ENST00000431230 679 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC112492.2-201ENST00000432774 1030 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 EMC3-AS1-205ENST00000438698 534 ntBASIC5.94□□□□□ -1.46
RAE1P78406 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 PA2G4P1-201ENST00000442248 1197 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC092601.1-201ENST00000444526 383 ntBASIC5.94□□□□□ -1.46
RAE1P78406 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 HMGN1P5-201ENST00000448591 263 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AL445991.1-201ENST00000450381 475 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.94□□□□□ -1.46
RAE1P78406 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 RN7SL326P-201ENST00000477493 296 ntBASIC5.94□□□□□ -1.46
RAE1P78406 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
RAE1P78406 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 OR9N1P-202ENST00000494289 481 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC008945.1-201ENST00000505144 499 ntBASIC5.94□□□□□ -1.46
RAE1P78406 OR4D12P-201ENST00000509361 911 ntBASIC5.94□□□□□ -1.46
RAE1P78406 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.94□□□□□ -1.46
RAE1P78406 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 AP001858.2-201ENST00000536213 601 ntBASIC5.94□□□□□ -1.46
RAE1P78406 TDGP1-201ENST00000543961 1229 ntBASIC5.94□□□□□ -1.46
RAE1P78406 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.94□□□□□ -1.46
RAE1P78406 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.94□□□□□ -1.46
RAE1P78406 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.94□□□□□ -1.46
RAE1P78406 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.94□□□□□ -1.46
RAE1P78406 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.94□□□□□ -1.46
RAE1P78406 NPM1P5-201ENST00000557228 838 ntBASIC5.94□□□□□ -1.46
RAE1P78406 HMGN1P26-201ENST00000558737 303 ntBASIC5.94□□□□□ -1.46
RAE1P78406 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.94□□□□□ -1.46
RAE1P78406 MIR3157-201ENST00000578688 85 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.94□□□□□ -1.46
RAE1P78406 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.94□□□□□ -1.46
RAE1P78406 AC063977.7-201ENST00000594454 337 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC027334.1-201ENST00000603257 310 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC022001.1-201ENST00000605193 268 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC034236.3-201ENST00000605999 461 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC004775.1-201ENST00000607389 753 ntBASIC5.94□□□□□ -1.46
RAE1P78406 AC112503.2-201ENST00000609005 552 ntBASIC5.94□□□□□ -1.46
RAE1P78406 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.94□□□□□ -1.46
RAE1P78406 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RAE1P78406 AP003485.1-201ENST00000625093 753 ntBASIC5.94□□□□□ -1.46
RAE1P78406 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
RAE1P78406 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RAE1P78406 AL359976.1-201ENST00000418655 3528 ntBASIC5.94□□□□□ -1.46
RAE1P78406 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RAE1P78406 AL121768.1-201ENST00000613917 2544 ntBASIC5.94□□□□□ -1.46
RAE1P78406 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RAE1P78406 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms