Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN20P56880 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN20P56880 POU5F1P5-201ENST00000445059 658 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AC073072.2-201ENST00000447425 348 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.7□□□□□ -1.5
CLDN20P56880 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN20P56880 VN1R38P-201ENST00000450265 887 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN20P56880 RPL12P31-201ENST00000478433 450 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 OR9A1P-202ENST00000484361 945 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 RN7SL362P-201ENST00000494228 267 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN20P56880 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.7□□□□□ -1.5
CLDN20P56880 HMGN1P17-201ENST00000513734 295 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 Vault.2-201ENST00000516519 98 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 NPIPB14P-203ENST00000532298 987 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN20P56880 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN20P56880 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 TMF1P1-201ENST00000576058 373 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.7□□□□□ -1.5
CLDN20P56880 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 RPL21P136-201ENST00000605378 396 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AC006213.4-201ENST00000616184 634 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN20P56880 OR51C1P-202ENST00000641159 1444 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN20P56880 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLDN20P56880 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN20P56880 AC123769.1-201ENST00000530992 3192 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 AC105235.1-201ENST00000623208 1816 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CLDN20P56880 SHQ1P1-201ENST00000437111 1544 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 AP002512.4-202ENST00000641599 4530 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
CLDN20P56880 RNU6-386P-201ENST00000362650 107 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 MIR7-1-201ENST00000384871 110 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 RPL24P2-201ENST00000421023 475 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 OR5W1P-201ENST00000423705 938 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 AC108479.1-201ENST00000431142 427 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 MTCO1P57-201ENST00000432182 261 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.69□□□□□ -1.5
CLDN20P56880 SOCS5P1-201ENST00000440415 949 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN20P56880 RPL5P10-201ENST00000445207 894 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 AC118758.1-202ENST00000454719 225 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 AL133351.3-201ENST00000454998 193 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 AC019084.1-201ENST00000457337 432 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 RN7SL168P-201ENST00000463821 279 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC021006.1-201ENST00000489849 553 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.69□□□□□ -1.5
CLDN20P56880 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.69□□□□□ -1.5
CLDN20P56880 OR4D12P-201ENST00000509361 911 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 AC018797.1-201ENST00000510791 255 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN20P56880 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 OR4A42P-201ENST00000531397 938 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 OR4A40P-201ENST00000533878 948 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLDN20P56880 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN20P56880 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN20P56880 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN20P56880 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN20P56880 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.69□□□□□ -1.5
CLDN20P56880 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.69□□□□□ -1.5
CLDN20P56880 AC020763.5-201ENST00000623298 430 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 AC139426.3-201ENST00000605648 2059 ntBASIC5.69□□□□□ -1.5
CLDN20P56880 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms