Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
VCPP55072 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VCPP55072 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.64□□□□□ -1.35
VCPP55072 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VCPP55072 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VCPP55072 MAPK10-261ENST00000641050 3109 ntBASIC6.64□□□□□ -1.35
VCPP55072 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
VCPP55072 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.64□□□□□ -1.35
VCPP55072 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
VCPP55072 OR52B3P-201ENST00000314715 928 ntBASIC6.64□□□□□ -1.35
VCPP55072 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
VCPP55072 RNA5SP514-201ENST00000363717 111 ntBASIC6.64□□□□□ -1.35
VCPP55072 SNORA74A-201ENST00000364089 198 ntBASIC6.64□□□□□ -1.35
VCPP55072 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.64□□□□□ -1.35
VCPP55072 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.64□□□□□ -1.35
VCPP55072 MED28P4-201ENST00000433137 572 ntBASIC6.64□□□□□ -1.35
VCPP55072 MRPS21P3-201ENST00000436696 262 ntBASIC6.64□□□□□ -1.35
VCPP55072 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.64□□□□□ -1.35
VCPP55072 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.64□□□□□ -1.35
VCPP55072 PPIAP7-201ENST00000454070 489 ntBASIC6.64□□□□□ -1.35
VCPP55072 CST12P-201ENST00000457644 362 ntBASIC6.64□□□□□ -1.35
VCPP55072 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
VCPP55072 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.64□□□□□ -1.35
VCPP55072 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.64□□□□□ -1.35
VCPP55072 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.64□□□□□ -1.35
VCPP55072 AC114781.3-201ENST00000512083 142 ntBASIC6.64□□□□□ -1.35
VCPP55072 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VCPP55072 RNA5SP362-201ENST00000516048 118 ntBASIC6.64□□□□□ -1.35
VCPP55072 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.64□□□□□ -1.35
VCPP55072 AP000620.1-201ENST00000527147 504 ntBASIC6.64□□□□□ -1.35
VCPP55072 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.64□□□□□ -1.35
VCPP55072 TPRX1P1-201ENST00000557620 319 ntBASIC6.64□□□□□ -1.35
VCPP55072 AP005136.2-201ENST00000583253 1049 ntBASIC6.64□□□□□ -1.35
VCPP55072 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.64□□□□□ -1.35
VCPP55072 AC092681.3-201ENST00000609463 678 ntBASIC6.64□□□□□ -1.35
VCPP55072 AP003789.1-201ENST00000617737 605 ntBASIC6.64□□□□□ -1.35
VCPP55072 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.64□□□□□ -1.35
VCPP55072 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.64□□□□□ -1.35
VCPP55072 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.64□□□□□ -1.35
VCPP55072 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.64□□□□□ -1.35
VCPP55072 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.64□□□□□ -1.35
VCPP55072 NR1H5P-201ENST00000452683 1377 ntBASIC6.64□□□□□ -1.35
VCPP55072 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.64□□□□□ -1.35
VCPP55072 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VCPP55072 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
VCPP55072 AL353763.1-201ENST00000624467 1628 ntBASIC6.64□□□□□ -1.35
VCPP55072 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VCPP55072 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VCPP55072 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VCPP55072 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VCPP55072 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VCPP55072 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VCPP55072 MAPK10-287ENST00000641217 3037 ntBASIC6.63□□□□□ -1.35
VCPP55072 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 OR9K1P-201ENST00000326513 941 ntBASIC6.63□□□□□ -1.35
VCPP55072 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 RNA5SP273-201ENST00000362484 113 ntBASIC6.63□□□□□ -1.35
VCPP55072 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VCPP55072 HSPD1P8-201ENST00000400121 1658 ntBASIC6.63□□□□□ -1.35
VCPP55072 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 LDHAP2-201ENST00000437325 985 ntBASIC6.63□□□□□ -1.35
VCPP55072 AL353743.3-201ENST00000442109 1468 ntBASIC6.63□□□□□ -1.35
VCPP55072 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 SERPINA7P1-201ENST00000443077 631 ntBASIC6.63□□□□□ -1.35
VCPP55072 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VCPP55072 ACA64.1-201ENST00000459171 127 ntBASIC6.63□□□□□ -1.35
VCPP55072 RPS23P1-201ENST00000491662 432 ntBASIC6.63□□□□□ -1.35
VCPP55072 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.63□□□□□ -1.35
VCPP55072 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VCPP55072 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VCPP55072 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.63□□□□□ -1.35
VCPP55072 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 AC092944.2-201ENST00000605443 889 ntBASIC6.63□□□□□ -1.35
VCPP55072 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.63□□□□□ -1.35
VCPP55072 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 MIR6748-201ENST00000610433 71 ntBASIC6.63□□□□□ -1.35
VCPP55072 RN7SL787P-201ENST00000613000 284 ntBASIC6.63□□□□□ -1.35
VCPP55072 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.63□□□□□ -1.35
VCPP55072 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VCPP55072 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.62□□□□□ -1.35
VCPP55072 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 AP004289.1-201ENST00000436307 2205 ntBASIC6.62□□□□□ -1.35
VCPP55072 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.62□□□□□ -1.35
VCPP55072 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
VCPP55072 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.62□□□□□ -1.35
VCPP55072 OR11H13P-201ENST00000359695 979 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms