Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.08□□□□□ -1.44
NR1H2P55055 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.08□□□□□ -1.44
NR1H2P55055 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.08□□□□□ -1.44
NR1H2P55055 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.08□□□□□ -1.44
NR1H2P55055 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.08□□□□□ -1.44
NR1H2P55055 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.08□□□□□ -1.44
NR1H2P55055 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NR1H2P55055 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.08□□□□□ -1.44
NR1H2P55055 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.08□□□□□ -1.44
NR1H2P55055 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.08□□□□□ -1.44
NR1H2P55055 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 RPL21P136-201ENST00000605378 396 ntBASIC6.08□□□□□ -1.44
NR1H2P55055 AC093635.1-201ENST00000609028 555 ntBASIC6.08□□□□□ -1.44
NR1H2P55055 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.08□□□□□ -1.44
NR1H2P55055 RNA5SP439-201ENST00000617595 124 ntBASIC6.08□□□□□ -1.44
NR1H2P55055 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 AC092159.4-201ENST00000624944 550 ntBASIC6.08□□□□□ -1.44
NR1H2P55055 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.08□□□□□ -1.44
NR1H2P55055 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
NR1H2P55055 AL596275.2-207ENST00000641188 675 ntBASIC6.08□□□□□ -1.44
NR1H2P55055 AL121936.2-201ENST00000641935 662 ntBASIC6.08□□□□□ -1.44
NR1H2P55055 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 AC102941.1-201ENST00000567616 1537 ntBASIC6.08□□□□□ -1.44
NR1H2P55055 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.08□□□□□ -1.44
NR1H2P55055 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.08□□□□□ -1.44
NR1H2P55055 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.08□□□□□ -1.44
NR1H2P55055 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.08□□□□□ -1.44
NR1H2P55055 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NR1H2P55055 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.07□□□□□ -1.44
NR1H2P55055 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
NR1H2P55055 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 AL442128.2-201ENST00000620246 1824 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.07□□□□□ -1.44
NR1H2P55055 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
NR1H2P55055 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 MIR137-201ENST00000385223 102 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 YWHAZP4-201ENST00000392459 708 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AL391419.1-201ENST00000398901 1275 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 RN7SKP146-201ENST00000410242 334 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 NENFP1-201ENST00000419476 466 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.07□□□□□ -1.44
NR1H2P55055 MTND4LP7-201ENST00000431728 294 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NR1H2P55055 ARAFP2-201ENST00000440565 559 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.07□□□□□ -1.44
NR1H2P55055 AC245517.2-201ENST00000442890 346 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC079922.1-201ENST00000443291 359 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC092601.1-201ENST00000444526 383 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.07□□□□□ -1.44
NR1H2P55055 RPS18P1-201ENST00000447840 458 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.07□□□□□ -1.44
NR1H2P55055 AL445687.2-201ENST00000458156 728 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 RN7SKP183-201ENST00000517169 324 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.07□□□□□ -1.44
NR1H2P55055 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.07□□□□□ -1.44
NR1H2P55055 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 IGLVV-66-201ENST00000523818 341 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.07□□□□□ -1.44
NR1H2P55055 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.07□□□□□ -1.44
NR1H2P55055 NXPE2P1-201ENST00000543705 726 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 OR4H6P-201ENST00000563771 921 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC090651.1-201ENST00000567865 634 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 FAM106CP-201ENST00000582212 507 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 RPL7AP69-201ENST00000595306 806 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC025857.2-201ENST00000602711 238 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 MTCO2P22-201ENST00000603246 681 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC007255.2-201ENST00000604053 631 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 AC017037.4-201ENST00000624526 826 ntBASIC6.07□□□□□ -1.44
NR1H2P55055 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.07□□□□□ -1.44
NR1H2P55055 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms