Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPSAP37-201ENST00000470913 821 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.27□□□□□ -1.41
LIMK1P53667 OR4D12P-201ENST00000509361 911 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 SUMO2P19-201ENST00000518920 295 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.27□□□□□ -1.41
LIMK1P53667 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.27□□□□□ -1.41
LIMK1P53667 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
LIMK1P53667 AC091078.2-201ENST00000557145 559 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.27□□□□□ -1.41
LIMK1P53667 AC092121.1-201ENST00000569452 202 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.27□□□□□ -1.41
LIMK1P53667 AC087575.1-201ENST00000585087 229 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.27□□□□□ -1.41
LIMK1P53667 SUMO2P15-201ENST00000604285 278 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 AC087468.1-201ENST00000604365 630 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.27□□□□□ -1.41
LIMK1P53667 AC018692.2-201ENST00000624130 348 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
LIMK1P53667 OR13C1P-202ENST00000641378 2919 ntBASIC6.27□□□□□ -1.41
LIMK1P53667 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.27□□□□□ -1.41
LIMK1P53667 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.27□□□□□ -1.41
LIMK1P53667 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LIMK1P53667 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 AC233968.1-201ENST00000611212 1300 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LIMK1P53667 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC125238.2-201ENST00000430003 1440 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.26□□□□□ -1.41
LIMK1P53667 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 RACGAP1P-201ENST00000550663 1879 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
LIMK1P53667 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LIMK1P53667 SNORA74A-201ENST00000364089 198 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LIMK1P53667 RNA5SP251-201ENST00000410614 137 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 AC234781.4-201ENST00000419384 244 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.26□□□□□ -1.41
LIMK1P53667 AL451136.1-201ENST00000435399 325 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.26□□□□□ -1.41
LIMK1P53667 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC064862.4-201ENST00000442180 334 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 AC016908.1-201ENST00000442571 1219 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC108043.1-201ENST00000512696 574 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.26□□□□□ -1.41
LIMK1P53667 RNA5SP438-201ENST00000516561 112 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC092375.1-201ENST00000550410 637 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.26□□□□□ -1.41
LIMK1P53667 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC068768.2-201ENST00000602352 343 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 AC073046.2-201ENST00000604756 527 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 AC092944.2-201ENST00000605443 889 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 RN7SL787P-201ENST00000613000 284 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 PARP4P1-201ENST00000435945 2337 ntBASIC6.26□□□□□ -1.41
LIMK1P53667 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LIMK1P53667 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.26□□□□□ -1.41
LIMK1P53667 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LIMK1P53667 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.25□□□□□ -1.41
LIMK1P53667 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms