Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC020658.4-201ENST00000613987 684 ntBASIC5.98□□□□□ -1.45
PDX1P52945 AC024255.1-201ENST00000614376 102 ntBASIC5.98□□□□□ -1.45
PDX1P52945 AC245014.3-201ENST00000618589 347 ntBASIC5.98□□□□□ -1.45
PDX1P52945 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDX1P52945 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PDX1P52945 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDX1P52945 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDX1P52945 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PDX1P52945 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDX1P52945 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PDX1P52945 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 OR52B3P-201ENST00000314715 928 ntBASIC5.97□□□□□ -1.45
PDX1P52945 TMSB4XP4-201ENST00000323496 618 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
PDX1P52945 RNA5SP350-201ENST00000363298 111 ntBASIC5.97□□□□□ -1.45
PDX1P52945 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.97□□□□□ -1.45
PDX1P52945 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.97□□□□□ -1.45
PDX1P52945 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.97□□□□□ -1.45
PDX1P52945 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.97□□□□□ -1.45
PDX1P52945 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.97□□□□□ -1.45
PDX1P52945 AL161636.2-201ENST00000445179 927 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AC011476.1-201ENST00000466725 307 ntBASIC5.97□□□□□ -1.45
PDX1P52945 ABCA11P-202ENST00000504019 2110 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AC090958.1-201ENST00000511122 351 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.97□□□□□ -1.45
PDX1P52945 RNU6-551P-201ENST00000516661 103 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AP003396.4-201ENST00000527574 265 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.97□□□□□ -1.45
PDX1P52945 AP005119.1-201ENST00000580956 292 ntBASIC5.97□□□□□ -1.45
PDX1P52945 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.97□□□□□ -1.45
PDX1P52945 AC233702.7-202ENST00000582941 211 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.97□□□□□ -1.45
PDX1P52945 AC090236.2-201ENST00000587933 1101 ntBASIC5.97□□□□□ -1.45
PDX1P52945 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.97□□□□□ -1.45
PDX1P52945 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.97□□□□□ -1.45
PDX1P52945 AC010615.3-201ENST00000597319 394 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AL512624.1-201ENST00000613638 469 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.97□□□□□ -1.45
PDX1P52945 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDX1P52945 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.97□□□□□ -1.45
PDX1P52945 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.97□□□□□ -1.45
PDX1P52945 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PDX1P52945 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 RNF19BPY-201ENST00000458209 1550 ntBASIC5.97□□□□□ -1.45
PDX1P52945 AC233968.1-201ENST00000611212 1300 ntBASIC5.97□□□□□ -1.45
PDX1P52945 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDX1P52945 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.96□□□□□ -1.45
PDX1P52945 AC110373.1-201ENST00000505994 3505 ntBASIC5.96□□□□□ -1.45
PDX1P52945 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PDX1P52945 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PDX1P52945 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDX1P52945 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.96□□□□□ -1.45
PDX1P52945 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.96□□□□□ -1.45
PDX1P52945 AC011815.2-201ENST00000618230 2021 ntBASIC5.96□□□□□ -1.45
PDX1P52945 RBMY1HP-201ENST00000382759 1389 ntBASIC5.96□□□□□ -1.45
PDX1P52945 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
PDX1P52945 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.96□□□□□ -1.46
PDX1P52945 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PDX1P52945 RNU1-150P-201ENST00000362491 162 ntBASIC5.96□□□□□ -1.46
PDX1P52945 AL132875.1-201ENST00000403623 949 ntBASIC5.96□□□□□ -1.46
PDX1P52945 RPS21P8-201ENST00000413365 247 ntBASIC5.96□□□□□ -1.46
PDX1P52945 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.96□□□□□ -1.46
PDX1P52945 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 UBE2V2P3-201ENST00000433562 437 ntBASIC5.96□□□□□ -1.46
PDX1P52945 PPIAP10-201ENST00000438675 458 ntBASIC5.96□□□□□ -1.46
PDX1P52945 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.96□□□□□ -1.46
PDX1P52945 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.96□□□□□ -1.46
PDX1P52945 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.96□□□□□ -1.46
PDX1P52945 SNX18P26-201ENST00000458433 740 ntBASIC5.96□□□□□ -1.46
PDX1P52945 RN7SL193P-201ENST00000491708 276 ntBASIC5.96□□□□□ -1.46
PDX1P52945 AC106800.3-201ENST00000511389 308 ntBASIC5.96□□□□□ -1.46
PDX1P52945 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 SCARNA18.1-201ENST00000516330 83 ntBASIC5.96□□□□□ -1.46
PDX1P52945 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.96□□□□□ -1.46
PDX1P52945 AC021269.1-201ENST00000526860 705 ntBASIC5.96□□□□□ -1.46
PDX1P52945 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.96□□□□□ -1.46
PDX1P52945 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PDX1P52945 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDX1P52945 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.96□□□□□ -1.46
PDX1P52945 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.96□□□□□ -1.46
PDX1P52945 AC018558.5-201ENST00000565840 952 ntBASIC5.96□□□□□ -1.46
PDX1P52945 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.96□□□□□ -1.46
PDX1P52945 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.96□□□□□ -1.46
PDX1P52945 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.96□□□□□ -1.46
PDX1P52945 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.96□□□□□ -1.46
PDX1P52945 MIR6809-201ENST00000612189 116 ntBASIC5.96□□□□□ -1.46
PDX1P52945 AC126175.1-201ENST00000617041 758 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms