Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USP11P51784 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
USP11P51784 AC011503.2-201ENST00000594230 1500 ntBASIC7.73□□□□□ -1.17
USP11P51784 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 MAPK10-365ENST00000641902 3825 ntBASIC7.72□□□□□ -1.17
USP11P51784 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.72□□□□□ -1.17
USP11P51784 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
USP11P51784 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 MAPK10-323ENST00000641493 3207 ntBASIC7.72□□□□□ -1.17
USP11P51784 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 AP005139.1-201ENST00000580702 1647 ntBASIC7.72□□□□□ -1.17
USP11P51784 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 UBBP1-201ENST00000392399 473 ntBASIC7.72□□□□□ -1.17
USP11P51784 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.72□□□□□ -1.17
USP11P51784 SLC9B1P2-201ENST00000398120 1184 ntBASIC7.72□□□□□ -1.17
USP11P51784 SNORA79B-201ENST00000410557 148 ntBASIC7.72□□□□□ -1.17
USP11P51784 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 AC004022.2-201ENST00000413824 193 ntBASIC7.72□□□□□ -1.17
USP11P51784 AL663061.1-201ENST00000416625 580 ntBASIC7.72□□□□□ -1.17
USP11P51784 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.72□□□□□ -1.17
USP11P51784 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.72□□□□□ -1.17
USP11P51784 PTP4A1P3-201ENST00000433661 420 ntBASIC7.72□□□□□ -1.17
USP11P51784 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 AL008629.1-201ENST00000438615 184 ntBASIC7.72□□□□□ -1.17
USP11P51784 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.72□□□□□ -1.17
USP11P51784 AL353572.1-201ENST00000442490 417 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 CRYGGP-201ENST00000443337 145 ntBASIC7.72□□□□□ -1.17
USP11P51784 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.72□□□□□ -1.17
USP11P51784 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 VN1R32P-201ENST00000452234 905 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC092754.2-201ENST00000463506 460 ntBASIC7.72□□□□□ -1.17
USP11P51784 OR5H3P-201ENST00000502817 919 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC010374.1-201ENST00000503762 1237 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC7.72□□□□□ -1.17
USP11P51784 AC105420.1-201ENST00000504389 582 ntBASIC7.72□□□□□ -1.17
USP11P51784 FABP5P12-201ENST00000515543 389 ntBASIC7.72□□□□□ -1.17
USP11P51784 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.72□□□□□ -1.17
USP11P51784 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.72□□□□□ -1.17
USP11P51784 MTND2P26-201ENST00000528255 1029 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC140063.1-201ENST00000541343 259 ntBASIC7.72□□□□□ -1.17
USP11P51784 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
USP11P51784 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC7.72□□□□□ -1.17
USP11P51784 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.72□□□□□ -1.17
USP11P51784 AC095057.3-201ENST00000567102 1157 ntBASIC7.72□□□□□ -1.17
USP11P51784 RN7SL199P-201ENST00000578752 281 ntBASIC7.72□□□□□ -1.17
USP11P51784 RN7SL656P-201ENST00000579044 281 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 RN7SL404P-201ENST00000582421 281 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.72□□□□□ -1.17
USP11P51784 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.72□□□□□ -1.17
USP11P51784 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC073387.2-201ENST00000604797 784 ntBASIC7.72□□□□□ -1.17
USP11P51784 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 AC120057.5-201ENST00000623840 154 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC073530.2-201ENST00000623987 261 ntBASIC7.72□□□□□ -1.17
USP11P51784 AC005858.3-201ENST00000624756 589 ntBASIC7.72□□□□□ -1.17
USP11P51784 MARK2P4-201ENST00000503381 2380 ntBASIC7.72□□□□□ -1.17
USP11P51784 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.72□□□□□ -1.17
USP11P51784 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 AC096992.2-201ENST00000609553 1684 ntBASIC7.72□□□□□ -1.17
USP11P51784 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.72□□□□□ -1.17
USP11P51784 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 UG0898H09-202ENST00000623646 7040 ntBASIC7.72□□□□□ -1.17
USP11P51784 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
USP11P51784 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
USP11P51784 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
USP11P51784 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
USP11P51784 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
USP11P51784 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
USP11P51784 AP000641.1-201ENST00000531988 1639 ntBASIC7.71□□□□□ -1.17
USP11P51784 ASNSP6-201ENST00000592770 1618 ntBASIC7.71□□□□□ -1.17
USP11P51784 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
USP11P51784 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.71□□□□□ -1.17
USP11P51784 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
USP11P51784 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
USP11P51784 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
USP11P51784 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
USP11P51784 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.71□□□□□ -1.18
USP11P51784 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms