Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.47□□□□□ -1.21
MRE11P49959 AC090912.3-201ENST00000609775 533 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.47□□□□□ -1.21
MRE11P49959 AC027271.1-201ENST00000610270 610 ntBASIC7.47□□□□□ -1.21
MRE11P49959 AC008833.1-201ENST00000611633 691 ntBASIC7.47□□□□□ -1.21
MRE11P49959 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MRE11P49959 AL049777.1-201ENST00000622740 518 ntBASIC7.47□□□□□ -1.21
MRE11P49959 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.47□□□□□ -1.21
MRE11P49959 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.47□□□□□ -1.21
MRE11P49959 AC111152.1-202ENST00000635848 339 ntBASIC7.47□□□□□ -1.21
MRE11P49959 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.47□□□□□ -1.21
MRE11P49959 AC217777.1-201ENST00000570034 1471 ntBASIC7.47□□□□□ -1.21
MRE11P49959 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MRE11P49959 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.47□□□□□ -1.21
MRE11P49959 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
MRE11P49959 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
MRE11P49959 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC7.47□□□□□ -1.21
MRE11P49959 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.46□□□□□ -1.21
MRE11P49959 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.46□□□□□ -1.21
MRE11P49959 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
MRE11P49959 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
MRE11P49959 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.46□□□□□ -1.21
MRE11P49959 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.46□□□□□ -1.21
MRE11P49959 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.46□□□□□ -1.21
MRE11P49959 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
MRE11P49959 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.46□□□□□ -1.21
MRE11P49959 CASC19-260ENST00000641828 2001 ntBASIC7.46□□□□□ -1.22
MRE11P49959 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MRE11P49959 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
MRE11P49959 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
MRE11P49959 AL121977.1-201ENST00000401636 979 ntBASIC7.46□□□□□ -1.22
MRE11P49959 RN7SKP17-201ENST00000411242 351 ntBASIC7.46□□□□□ -1.22
MRE11P49959 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.46□□□□□ -1.22
MRE11P49959 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.46□□□□□ -1.22
MRE11P49959 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC7.46□□□□□ -1.22
MRE11P49959 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 RPL7AP14-201ENST00000424041 802 ntBASIC7.46□□□□□ -1.22
MRE11P49959 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 FAR1P1-201ENST00000427163 934 ntBASIC7.46□□□□□ -1.22
MRE11P49959 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.46□□□□□ -1.22
MRE11P49959 AC234771.2-201ENST00000445718 597 ntBASIC7.46□□□□□ -1.22
MRE11P49959 CYCSP44-201ENST00000448560 313 ntBASIC7.46□□□□□ -1.22
MRE11P49959 VN1R38P-201ENST00000450265 887 ntBASIC7.46□□□□□ -1.22
MRE11P49959 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.46□□□□□ -1.22
MRE11P49959 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.46□□□□□ -1.22
MRE11P49959 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.46□□□□□ -1.22
MRE11P49959 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 OR8X1P-201ENST00000534542 869 ntBASIC7.46□□□□□ -1.22
MRE11P49959 AC006512.2-201ENST00000543250 486 ntBASIC7.46□□□□□ -1.22
MRE11P49959 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 MIR4732-201ENST00000581873 76 ntBASIC7.46□□□□□ -1.22
MRE11P49959 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.46□□□□□ -1.22
MRE11P49959 OR1AB1P-201ENST00000585564 761 ntBASIC7.46□□□□□ -1.22
MRE11P49959 AC008507.2-201ENST00000588402 1176 ntBASIC7.46□□□□□ -1.22
MRE11P49959 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.46□□□□□ -1.22
MRE11P49959 AC013244.1-201ENST00000604279 193 ntBASIC7.46□□□□□ -1.22
MRE11P49959 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.46□□□□□ -1.22
MRE11P49959 AC026108.1-201ENST00000635444 547 ntBASIC7.46□□□□□ -1.22
MRE11P49959 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.46□□□□□ -1.22
MRE11P49959 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC7.46□□□□□ -1.22
MRE11P49959 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.46□□□□□ -1.22
MRE11P49959 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
MRE11P49959 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MRE11P49959 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MRE11P49959 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
MRE11P49959 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
MRE11P49959 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.46□□□□□ -1.22
MRE11P49959 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
MRE11P49959 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.45□□□□□ -1.22
MRE11P49959 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
MRE11P49959 AC010329.1-201ENST00000593903 8328 ntBASIC7.45□□□□□ -1.22
MRE11P49959 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7.45□□□□□ -1.22
MRE11P49959 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
MRE11P49959 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.45□□□□□ -1.22
MRE11P49959 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
MRE11P49959 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
MRE11P49959 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 AL512422.1-201ENST00000407033 553 ntBASIC7.45□□□□□ -1.22
MRE11P49959 RNA5SP155-201ENST00000411154 129 ntBASIC7.45□□□□□ -1.22
MRE11P49959 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
MRE11P49959 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 NIPA2P1-201ENST00000426223 976 ntBASIC7.45□□□□□ -1.22
MRE11P49959 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 BX323845.2-201ENST00000458382 234 ntBASIC7.45□□□□□ -1.22
MRE11P49959 AC079193.1-201ENST00000460497 588 ntBASIC7.45□□□□□ -1.22
MRE11P49959 MTND3P24-201ENST00000506306 329 ntBASIC7.45□□□□□ -1.22
MRE11P49959 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.45□□□□□ -1.22
MRE11P49959 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms