Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXA1P49639 AC107952.1-201ENST00000524200 376 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA1P49639 AP003049.1-201ENST00000529418 457 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 AP004609.2-201ENST00000532177 190 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 OR4A43P-201ENST00000532938 908 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 MIR4800-201ENST00000537353 80 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 AC073916.1-201ENST00000545095 130 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 LSM3P2-201ENST00000551246 273 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 NPM1P42-201ENST00000560329 862 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXA1P49639 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 ANP32BP1-202ENST00000568553 737 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 MIR4685-201ENST00000578185 69 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA1P49639 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 AL035417.2-201ENST00000603887 796 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 BNIP3P19-201ENST00000605397 577 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 AL008582.1-201ENST00000609612 442 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 AP001264.1-201ENST00000620602 703 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA1P49639 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA1P49639 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXA1P49639 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA1P49639 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA1P49639 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA1P49639 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA1P49639 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA1P49639 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA1P49639 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.23□□□□□ -1.57
HOXA1P49639 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXA1P49639 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXA1P49639 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HOXA1P49639 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 MIR187-201ENST00000385062 109 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 UBBP1-201ENST00000392399 473 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 AL662791.3-201ENST00000413771 776 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AL512504.1-201ENST00000415494 778 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA1P49639 AL929472.1-201ENST00000417484 429 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 OR6C64P-201ENST00000419708 825 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 CLIC4P3-201ENST00000422221 752 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 HSFY7P-201ENST00000432672 318 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 HSFY8P-201ENST00000437934 318 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AC019185.3-201ENST00000438805 323 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXA1P49639 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 AL353718.1-201ENST00000451028 517 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 HSFY5P-201ENST00000453726 309 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 SNX18P26-201ENST00000458433 740 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 RPL23AP64-201ENST00000469465 435 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 RPL12P24-201ENST00000474907 486 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 EIF3LP3-201ENST00000495197 822 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AC022206.1-201ENST00000495947 347 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 MTND3P24-201ENST00000506306 329 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXA1P49639 AC010442.1-201ENST00000515583 816 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 RNU6-760P-201ENST00000516078 97 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 AP005902.2-201ENST00000518393 307 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA1P49639 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA1P49639 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA1P49639 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA1P49639 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA1P49639 LINC00556-201ENST00000569603 412 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXA1P49639 AC090330.1-201ENST00000588646 764 ntBASIC5.22□□□□□ -1.57
HOXA1P49639 AC024589.2-201ENST00000605642 1294 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms