Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RPS7P4-201ENST00000444127 582 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 BUD31P2-201ENST00000449374 300 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX2-1P43699 RAB28P2-201ENST00000454299 641 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AC010343.2-201ENST00000510162 224 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 MIR4800-201ENST00000537353 80 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AC008147.3-201ENST00000548666 354 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AC091304.5-201ENST00000568969 158 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AC091932.1-201ENST00000569381 427 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 MIR5682-201ENST00000584864 76 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AP001357.1-201ENST00000586304 1053 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AC090241.1-201ENST00000587732 621 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AL353807.4-201ENST00000604995 257 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 RPL12P48-201ENST00000605620 304 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 AC103564.3-201ENST00000621194 220 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AC007347.2-201ENST00000623044 180 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 AC005858.3-201ENST00000624756 589 ntBASIC5.09□□□□□ -1.59
NKX2-1P43699 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
NKX2-1P43699 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX2-1P43699 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX2-1P43699 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NKX2-1P43699 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NKX2-1P43699 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NKX2-1P43699 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
NKX2-1P43699 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
NKX2-1P43699 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX2-1P43699 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX2-1P43699 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-1P43699 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 BCORP1-203ENST00000513194 5093 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NKX2-1P43699 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 AP000432.2-201ENST00000624164 2048 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NKX2-1P43699 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NKX2-1P43699 RNU6-1251P-201ENST00000364502 107 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 SNORA27.3-201ENST00000364937 134 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 AL445238.1-204ENST00000400311 463 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 RN7SKP137-201ENST00000411074 307 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 AC024937.2-201ENST00000411669 1242 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX2-1P43699 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.08□□□□□ -1.6
NKX2-1P43699 MTND1P10-201ENST00000426108 832 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AL138479.1-201ENST00000426913 484 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 OR52S1P-201ENST00000427016 937 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 MTND4LP14-201ENST00000429447 288 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 GAPDHP75-201ENST00000433910 943 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 RPS3AP38-201ENST00000435889 763 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX2-1P43699 Z99127.2-201ENST00000441426 334 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC239798.3-201ENST00000454459 408 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 OSTCP1-201ENST00000455507 450 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NKX2-1P43699 CBX5P1-201ENST00000468470 561 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC134698.1-201ENST00000511619 643 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 IGKV1D-32-201ENST00000517449 318 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-1P43699 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX2-1P43699 MIMT1-201ENST00000597105 1050 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 AC009283.1-201ENST00000615852 645 ntBASIC5.08□□□□□ -1.6
NKX2-1P43699 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX2-1P43699 AL133370.2-201ENST00000619934 439 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms