Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SNORA11E-201ENST00000408778 128 ntBASIC4.28□□□□□ -1.72
CKS2P33552 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC4.28□□□□□ -1.72
CKS2P33552 AL133482.1-201ENST00000415988 498 ntBASIC4.28□□□□□ -1.72
CKS2P33552 AC017078.1-201ENST00000416146 368 ntBASIC4.28□□□□□ -1.72
CKS2P33552 RPL18AP14-201ENST00000417685 526 ntBASIC4.28□□□□□ -1.72
CKS2P33552 DPPA2P2-201ENST00000418220 897 ntBASIC4.28□□□□□ -1.72
CKS2P33552 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 POU5F1P5-201ENST00000445059 658 ntBASIC4.28□□□□□ -1.72
CKS2P33552 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 AC092421.1-201ENST00000448148 418 ntBASIC4.28□□□□□ -1.72
CKS2P33552 AC099670.1-201ENST00000455141 783 ntBASIC4.28□□□□□ -1.72
CKS2P33552 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
CKS2P33552 SNORA70.11-201ENST00000515987 138 ntBASIC4.28□□□□□ -1.72
CKS2P33552 SNORA70.13-201ENST00000516116 138 ntBASIC4.28□□□□□ -1.72
CKS2P33552 MIR2117-201ENST00000516780 80 ntBASIC4.28□□□□□ -1.72
CKS2P33552 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.28□□□□□ -1.72
CKS2P33552 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 GTF2IP11-201ENST00000526931 420 ntBASIC4.28□□□□□ -1.72
CKS2P33552 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.28□□□□□ -1.72
CKS2P33552 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 AC023080.1-201ENST00000551663 931 ntBASIC4.28□□□□□ -1.72
CKS2P33552 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS2P33552 OOSP1P2-201ENST00000579644 351 ntBASIC4.28□□□□□ -1.72
CKS2P33552 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CKS2P33552 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CKS2P33552 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS2P33552 NANOGP3-201ENST00000605855 286 ntBASIC4.28□□□□□ -1.72
CKS2P33552 AL589743.6-201ENST00000611025 117 ntBASIC4.28□□□□□ -1.72
CKS2P33552 AC241377.1-201ENST00000619797 406 ntBASIC4.28□□□□□ -1.72
CKS2P33552 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.28□□□□□ -1.72
CKS2P33552 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS2P33552 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 HSPD1P1-201ENST00000503199 1726 ntBASIC4.28□□□□□ -1.72
CKS2P33552 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
CKS2P33552 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS2P33552 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CKS2P33552 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
CKS2P33552 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CKS2P33552 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.27□□□□□ -1.73
CKS2P33552 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 UGT2B24P-201ENST00000514441 1597 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS2P33552 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
CKS2P33552 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 OR7A2P-201ENST00000304105 930 ntBASIC4.27□□□□□ -1.73
CKS2P33552 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 RNA5SP211-201ENST00000365516 117 ntBASIC4.27□□□□□ -1.73
CKS2P33552 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 RPL12P23-201ENST00000405880 490 ntBASIC4.27□□□□□ -1.73
CKS2P33552 SOD1P1-201ENST00000407803 440 ntBASIC4.27□□□□□ -1.73
CKS2P33552 RN7SKP144-201ENST00000411108 279 ntBASIC4.27□□□□□ -1.73
CKS2P33552 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS2P33552 AC099677.3-201ENST00000427081 395 ntBASIC4.27□□□□□ -1.73
CKS2P33552 HMGN2P27-201ENST00000427352 270 ntBASIC4.27□□□□□ -1.73
CKS2P33552 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AL645939.3-201ENST00000435408 225 ntBASIC4.27□□□□□ -1.73
CKS2P33552 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS2P33552 OR3D1P-201ENST00000438288 955 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AL512593.1-201ENST00000444758 779 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS2P33552 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 RN7SL70P-201ENST00000478322 302 ntBASIC4.27□□□□□ -1.73
CKS2P33552 RPL12P31-201ENST00000478433 450 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AC006539.1-201ENST00000481419 501 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 RPL7L1P7-201ENST00000509986 724 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AC114940.1-201ENST00000512162 1265 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.27□□□□□ -1.73
CKS2P33552 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS2P33552 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS2P33552 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS2P33552 AL359219.2-201ENST00000555184 348 ntBASIC4.27□□□□□ -1.73
CKS2P33552 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms