Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 AL161756.3-201ENST00000641216 2071 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 AC239868.2-201ENST00000564237 4527 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCL3L1P16619 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCL3L1P16619 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 RN7SKP275-201ENST00000364626 301 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.87□□□□□ -1.63
CCL3L1P16619 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AC066692.1-201ENST00000421721 457 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.87□□□□□ -1.63
CCL3L1P16619 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.87□□□□□ -1.63
CCL3L1P16619 RPS3AP38-201ENST00000435889 763 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 RPS12P17-201ENST00000438591 377 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 AL138899.2-201ENST00000439139 499 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 DNAJA1P5-201ENST00000440278 943 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 OR52E7P-201ENST00000452394 933 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 GEMIN2P1-201ENST00000454246 752 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 HLA-DPA3-207ENST00000454398 229 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 AL603882.1-201ENST00000463059 681 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 RPL38P3-201ENST00000484463 213 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 PFN1P8-201ENST00000497012 543 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AC006499.4-201ENST00000510947 694 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 RN7SKP248-201ENST00000516278 305 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 SCARNA9-201ENST00000530422 353 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AC068305.2-201ENST00000550567 1205 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.87□□□□□ -1.63
CCL3L1P16619 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AL138895.2-201ENST00000603019 178 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 AC067773.1-201ENST00000603284 1094 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 MIR6793-201ENST00000612376 63 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 SNX18P12-201ENST00000624821 759 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.87□□□□□ -1.63
CCL3L1P16619 OR11H2-202ENST00000641517 1085 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
CCL3L1P16619 AC130304.1-201ENST00000622942 2385 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC4.87□□□□□ -1.63
CCL3L1P16619 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCL3L1P16619 OR2AH1P-202ENST00000641232 2744 ntBASIC4.87□□□□□ -1.63
CCL3L1P16619 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.86□□□□□ -1.63
CCL3L1P16619 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.86□□□□□ -1.63
CCL3L1P16619 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCL3L1P16619 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 AC027088.4-201ENST00000611559 1947 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 SNORD1C-201ENST00000363315 78 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 RN7SKP128-201ENST00000364270 303 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 RNU1-59P-201ENST00000364829 162 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 SUGT1P2-201ENST00000379452 992 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 RAB5CP1-201ENST00000395972 580 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 BX284632.2-201ENST00000421091 399 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.86□□□□□ -1.63
CCL3L1P16619 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.86□□□□□ -1.63
CCL3L1P16619 NDUFS5P5-201ENST00000437256 321 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 TUBB4BP6-201ENST00000437576 479 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 AL512605.1-202ENST00000441919 381 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.86□□□□□ -1.63
CCL3L1P16619 HMGN1P2-201ENST00000445197 310 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 RPL5P10-201ENST00000445207 894 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 AL359955.2-201ENST00000445380 353 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 ACA64.1-201ENST00000459171 127 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
CCL3L1P16619 RN7SKP70-201ENST00000516655 271 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.86□□□□□ -1.63
CCL3L1P16619 OR4A42P-201ENST00000531397 938 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms