Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.08□□□□□ -1.44
PCNAP12004 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.08□□□□□ -1.44
PCNAP12004 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.08□□□□□ -1.44
PCNAP12004 AC022726.2-201ENST00000634673 547 ntBASIC6.08□□□□□ -1.44
PCNAP12004 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PCNAP12004 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.08□□□□□ -1.44
PCNAP12004 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.08□□□□□ -1.44
PCNAP12004 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 AL513548.1-201ENST00000562904 1724 ntBASIC6.08□□□□□ -1.44
PCNAP12004 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCNAP12004 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.07□□□□□ -1.44
PCNAP12004 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCNAP12004 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.07□□□□□ -1.44
PCNAP12004 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
PCNAP12004 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.07□□□□□ -1.44
PCNAP12004 SNORA40.4-201ENST00000390971 128 ntBASIC6.07□□□□□ -1.44
PCNAP12004 YWHAZP4-201ENST00000392459 708 ntBASIC6.07□□□□□ -1.44
PCNAP12004 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.07□□□□□ -1.44
PCNAP12004 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.07□□□□□ -1.44
PCNAP12004 AC128677.1-201ENST00000436016 442 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.07□□□□□ -1.44
PCNAP12004 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.07□□□□□ -1.44
PCNAP12004 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.07□□□□□ -1.44
PCNAP12004 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.07□□□□□ -1.44
PCNAP12004 AC103563.5-201ENST00000455643 364 ntBASIC6.07□□□□□ -1.44
PCNAP12004 RBMY2HP-201ENST00000457961 720 ntBASIC6.07□□□□□ -1.44
PCNAP12004 RN7SL221P-201ENST00000466190 281 ntBASIC6.07□□□□□ -1.44
PCNAP12004 SLC25A51P1-201ENST00000468432 871 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AC114324.2-202ENST00000503812 134 ntBASIC6.07□□□□□ -1.44
PCNAP12004 ATG10-AS1-201ENST00000504846 648 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AC010343.2-201ENST00000510162 224 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.07□□□□□ -1.44
PCNAP12004 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.07□□□□□ -1.44
PCNAP12004 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.07□□□□□ -1.44
PCNAP12004 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.07□□□□□ -1.44
PCNAP12004 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AC135983.3-201ENST00000528049 1226 ntBASIC6.07□□□□□ -1.44
PCNAP12004 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.07□□□□□ -1.44
PCNAP12004 AC009729.1-201ENST00000548873 1133 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.07□□□□□ -1.44
PCNAP12004 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.07□□□□□ -1.44
PCNAP12004 AC007494.1-201ENST00000562293 760 ntBASIC6.07□□□□□ -1.44
PCNAP12004 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.07□□□□□ -1.44
PCNAP12004 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.07□□□□□ -1.44
PCNAP12004 AC005332.4-201ENST00000592752 579 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.07□□□□□ -1.44
PCNAP12004 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.07□□□□□ -1.44
PCNAP12004 AC006924.1-201ENST00000610750 559 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AL133445.2-201ENST00000611191 527 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AC073575.2-201ENST00000614212 627 ntBASIC6.07□□□□□ -1.44
PCNAP12004 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 OR7E91P-202ENST00000642062 1198 ntBASIC6.07□□□□□ -1.44
PCNAP12004 AC027279.1-201ENST00000568885 4284 ntBASIC6.07□□□□□ -1.44
PCNAP12004 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PCNAP12004 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PCNAP12004 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.07□□□□□ -1.44
PCNAP12004 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PCNAP12004 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 NLRP3P1-201ENST00000622303 1785 ntBASIC6.06□□□□□ -1.44
PCNAP12004 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 AC110373.1-201ENST00000505994 3505 ntBASIC6.06□□□□□ -1.44
PCNAP12004 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCNAP12004 SNORA64.3-201ENST00000365647 134 ntBASIC6.06□□□□□ -1.44
PCNAP12004 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PCNAP12004 RNU11-6P-201ENST00000391127 133 ntBASIC6.06□□□□□ -1.44
PCNAP12004 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 AL360013.1-201ENST00000419031 858 ntBASIC6.06□□□□□ -1.44
PCNAP12004 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.06□□□□□ -1.44
PCNAP12004 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 NDUFA5P1-201ENST00000433858 341 ntBASIC6.06□□□□□ -1.44
PCNAP12004 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 EMC3-AS1-205ENST00000438698 534 ntBASIC6.06□□□□□ -1.44
PCNAP12004 MTCO3P43-201ENST00000440974 771 ntBASIC6.06□□□□□ -1.44
PCNAP12004 AC245291.3-201ENST00000443400 292 ntBASIC6.06□□□□□ -1.44
PCNAP12004 AC234771.2-201ENST00000445718 597 ntBASIC6.06□□□□□ -1.44
PCNAP12004 C1DP3-201ENST00000455013 423 ntBASIC6.06□□□□□ -1.44
PCNAP12004 RN7SL393P-201ENST00000463588 296 ntBASIC6.06□□□□□ -1.44
PCNAP12004 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.06□□□□□ -1.44
PCNAP12004 RN7SL369P-201ENST00000477138 299 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms