Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 RNA5SP375-201ENST00000362975 119 ntBASIC4.76□□□□□ -1.65
CD28P10747 SNORA51.1-201ENST00000363243 140 ntBASIC4.76□□□□□ -1.65
CD28P10747 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 AL096800.1-201ENST00000405326 893 ntBASIC4.76□□□□□ -1.65
CD28P10747 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 AL096829.1-201ENST00000413677 457 ntBASIC4.76□□□□□ -1.65
CD28P10747 RPL12P12-201ENST00000424633 501 ntBASIC4.76□□□□□ -1.65
CD28P10747 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 NDUFS5P5-201ENST00000437256 321 ntBASIC4.76□□□□□ -1.65
CD28P10747 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 AC011476.1-201ENST00000466725 307 ntBASIC4.76□□□□□ -1.65
CD28P10747 UBFD1P1-201ENST00000473259 814 ntBASIC4.76□□□□□ -1.65
CD28P10747 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 RNA5SP400-201ENST00000517155 111 ntBASIC4.76□□□□□ -1.65
CD28P10747 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 WBP1LP3-201ENST00000523033 208 ntBASIC4.76□□□□□ -1.65
CD28P10747 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.76□□□□□ -1.65
CD28P10747 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CD28P10747 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CD28P10747 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.76□□□□□ -1.65
CD28P10747 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 AC005244.1-201ENST00000582566 339 ntBASIC4.76□□□□□ -1.65
CD28P10747 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.76□□□□□ -1.65
CD28P10747 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CD28P10747 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 BIN2P1-201ENST00000504996 1530 ntBASIC4.76□□□□□ -1.65
CD28P10747 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.76□□□□□ -1.65
CD28P10747 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD28P10747 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CD28P10747 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CD28P10747 AC119674.1-202ENST00000641333 1860 ntBASIC4.75□□□□□ -1.65
CD28P10747 AC020656.2-201ENST00000613291 5309 ntBASIC4.75□□□□□ -1.65
CD28P10747 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CD28P10747 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CD28P10747 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CD28P10747 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CD28P10747 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CD28P10747 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CD28P10747 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.75□□□□□ -1.65
CD28P10747 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CD28P10747 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC4.75□□□□□ -1.65
CD28P10747 AC087752.1-201ENST00000391360 558 ntBASIC4.75□□□□□ -1.65
CD28P10747 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CD28P10747 AL354890.1-201ENST00000413730 346 ntBASIC4.75□□□□□ -1.65
CD28P10747 CDY17P-201ENST00000414121 1282 ntBASIC4.75□□□□□ -1.65
CD28P10747 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CD28P10747 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.75□□□□□ -1.65
CD28P10747 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.75□□□□□ -1.65
CD28P10747 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.75□□□□□ -1.65
CD28P10747 CHEK2P5-201ENST00000423877 246 ntBASIC4.75□□□□□ -1.65
CD28P10747 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC4.75□□□□□ -1.65
CD28P10747 BX323845.3-201ENST00000428215 527 ntBASIC4.75□□□□□ -1.65
CD28P10747 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.75□□□□□ -1.65
CD28P10747 PCBP2P1-201ENST00000437262 977 ntBASIC4.75□□□□□ -1.65
CD28P10747 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.75□□□□□ -1.65
CD28P10747 AL355355.1-201ENST00000442900 793 ntBASIC4.75□□□□□ -1.65
CD28P10747 AL161636.2-201ENST00000445179 927 ntBASIC4.75□□□□□ -1.65
CD28P10747 RPL36AP39-201ENST00000445859 318 ntBASIC4.75□□□□□ -1.65
CD28P10747 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.75□□□□□ -1.65
CD28P10747 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.75□□□□□ -1.65
CD28P10747 AP006222.1-205ENST00000450734 457 ntBASIC4.75□□□□□ -1.65
CD28P10747 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.75□□□□□ -1.65
CD28P10747 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.75□□□□□ -1.65
CD28P10747 AC092865.4-201ENST00000477936 615 ntBASIC4.75□□□□□ -1.65
CD28P10747 AC093719.1-201ENST00000480427 441 ntBASIC4.75□□□□□ -1.65
CD28P10747 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CD28P10747 SETP21-201ENST00000514799 892 ntBASIC4.75□□□□□ -1.65
CD28P10747 SCARNA18.1-201ENST00000516330 83 ntBASIC4.75□□□□□ -1.65
CD28P10747 IGHV1-14-201ENST00000523391 241 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms