Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
MMP3P08254 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.69□□□□□ -1.34
MMP3P08254 AC068733.2-201ENST00000605434 1418 ntBASIC6.69□□□□□ -1.34
MMP3P08254 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.69□□□□□ -1.34
MMP3P08254 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 RNA5SP333-201ENST00000363466 118 ntBASIC6.69□□□□□ -1.34
MMP3P08254 RNA5SP334-201ENST00000364825 118 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC117434.1-201ENST00000419971 836 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.69□□□□□ -1.34
MMP3P08254 AL121776.1-201ENST00000429337 372 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC126120.1-201ENST00000431082 470 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AL451136.1-201ENST00000435399 325 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AL445928.1-201ENST00000435545 222 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.69□□□□□ -1.34
MMP3P08254 AL022237.1-201ENST00000446663 358 ntBASIC6.69□□□□□ -1.34
MMP3P08254 RPL23AP60-201ENST00000450011 454 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.69□□□□□ -1.34
MMP3P08254 AC103563.5-201ENST00000455643 364 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC008629.2-201ENST00000503783 483 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.69□□□□□ -1.34
MMP3P08254 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.69□□□□□ -1.34
MMP3P08254 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.69□□□□□ -1.34
MMP3P08254 RNA5SP362-201ENST00000516048 118 ntBASIC6.69□□□□□ -1.34
MMP3P08254 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.69□□□□□ -1.34
MMP3P08254 KCTD9P4-201ENST00000526766 1166 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.69□□□□□ -1.34
MMP3P08254 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.69□□□□□ -1.34
MMP3P08254 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.69□□□□□ -1.34
MMP3P08254 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.69□□□□□ -1.34
MMP3P08254 AP001496.3-201ENST00000580230 913 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC015802.2-201ENST00000589690 189 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC119403.2-201ENST00000590960 598 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AC024589.2-201ENST00000605642 1294 ntBASIC6.69□□□□□ -1.34
MMP3P08254 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.69□□□□□ -1.34
MMP3P08254 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.69□□□□□ -1.34
MMP3P08254 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.69□□□□□ -1.34
MMP3P08254 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.69□□□□□ -1.34
MMP3P08254 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MMP3P08254 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.68□□□□□ -1.34
MMP3P08254 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.68□□□□□ -1.34
MMP3P08254 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.68□□□□□ -1.34
MMP3P08254 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
MMP3P08254 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 AC027279.1-201ENST00000568885 4284 ntBASIC6.68□□□□□ -1.34
MMP3P08254 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 SHQ1P1-201ENST00000437111 1544 ntBASIC6.68□□□□□ -1.34
MMP3P08254 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.68□□□□□ -1.34
MMP3P08254 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
MMP3P08254 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.68□□□□□ -1.34
MMP3P08254 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.68□□□□□ -1.34
MMP3P08254 AC006455.6-201ENST00000426192 893 ntBASIC6.68□□□□□ -1.34
MMP3P08254 AC127526.2-201ENST00000426436 775 ntBASIC6.68□□□□□ -1.34
MMP3P08254 BRWD1P3-201ENST00000428816 390 ntBASIC6.68□□□□□ -1.34
MMP3P08254 AC012497.1-201ENST00000429392 575 ntBASIC6.68□□□□□ -1.34
MMP3P08254 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.68□□□□□ -1.34
MMP3P08254 RSL24D1P2-201ENST00000445584 366 ntBASIC6.68□□□□□ -1.34
MMP3P08254 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.68□□□□□ -1.34
MMP3P08254 AC104164.1-201ENST00000460282 590 ntBASIC6.68□□□□□ -1.34
MMP3P08254 RPS26P39-201ENST00000469206 341 ntBASIC6.68□□□□□ -1.34
MMP3P08254 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.68□□□□□ -1.34
MMP3P08254 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.68□□□□□ -1.34
MMP3P08254 AC073581.1-201ENST00000519036 575 ntBASIC6.68□□□□□ -1.34
MMP3P08254 AP004607.6-201ENST00000525033 1202 ntBASIC6.68□□□□□ -1.34
MMP3P08254 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.68□□□□□ -1.34
MMP3P08254 AC022404.1-201ENST00000555320 273 ntBASIC6.68□□□□□ -1.34
MMP3P08254 AC091078.2-201ENST00000557145 559 ntBASIC6.68□□□□□ -1.34
MMP3P08254 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.68□□□□□ -1.34
MMP3P08254 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.68□□□□□ -1.34
MMP3P08254 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.68□□□□□ -1.34
MMP3P08254 MIR6826-201ENST00000617808 98 ntBASIC6.68□□□□□ -1.34
MMP3P08254 TCL6_3.1-201ENST00000619064 137 ntBASIC6.68□□□□□ -1.34
MMP3P08254 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.68□□□□□ -1.34
MMP3P08254 AC092724.1-201ENST00000624623 3397 ntBASIC6.68□□□□□ -1.34
MMP3P08254 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
MMP3P08254 AC093829.1-201ENST00000506662 1618 ntBASIC6.68□□□□□ -1.34
MMP3P08254 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
MMP3P08254 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MMP3P08254 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.68□□□□□ -1.34
MMP3P08254 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.68□□□□□ -1.34
MMP3P08254 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.67□□□□□ -1.34
MMP3P08254 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
MMP3P08254 PARP4P2-201ENST00000446672 3326 ntBASIC6.67□□□□□ -1.34
MMP3P08254 AL161901.1-201ENST00000624954 3425 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms