Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDGFAP04085 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
PDGFAP04085 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDGFAP04085 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDGFAP04085 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDGFAP04085 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDGFAP04085 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDGFAP04085 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.27□□□□□ -1.25
PDGFAP04085 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.27□□□□□ -1.25
PDGFAP04085 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.27□□□□□ -1.25
PDGFAP04085 AC068733.2-201ENST00000605434 1418 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 SMG1P1-202ENST00000309865 4223 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 THAP12P1-201ENST00000398672 2203 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 OR10J6P-201ENST00000289731 930 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PDGFAP04085 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 RN7SKP48-201ENST00000365031 328 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC092952.1-201ENST00000397646 1209 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 BTF3P7-201ENST00000407097 488 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 RNU6-77P-201ENST00000410554 91 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.26□□□□□ -1.25
PDGFAP04085 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.26□□□□□ -1.25
PDGFAP04085 PPIL1P1-201ENST00000423936 499 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 VDAC2P3-201ENST00000430995 828 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 CDY14P-201ENST00000431260 1014 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AL050321.1-201ENST00000432363 400 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 BX119917.1-201ENST00000432517 502 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
PDGFAP04085 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 HMGN1P32-201ENST00000441744 256 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 RPS26P30-201ENST00000443431 335 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 CDY23P-201ENST00000451661 1014 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AL358876.1-201ENST00000453364 1075 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.26□□□□□ -1.25
PDGFAP04085 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 TAAR3P-201ENST00000466706 1078 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 RPL34P22-201ENST00000468193 318 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 TAAR3P-202ENST00000481759 1025 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC073610.1-201ENST00000489971 396 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 RN7SL776P-201ENST00000493390 268 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC093281.2-201ENST00000510153 597 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 GTF2IP11-201ENST00000526931 420 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 EEF1B2P4-201ENST00000551398 348 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 MT1L-202ENST00000566367 78 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.26□□□□□ -1.25
PDGFAP04085 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PDGFAP04085 AC011193.2-201ENST00000582638 367 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 VN1R92P-201ENST00000598511 928 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.26□□□□□ -1.25
PDGFAP04085 OR7E94P-202ENST00000601375 790 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.26□□□□□ -1.25
PDGFAP04085 AC011472.4-201ENST00000615848 491 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 AC027506.1-201ENST00000621395 198 ntBASIC7.26□□□□□ -1.25
PDGFAP04085 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
PDGFAP04085 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms