Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RNA5SP152-201ENST00000365184 110 ntBASIC5.3□□□□□ -1.56
APOA1P02647 RNA5SP355-201ENST00000365317 135 ntBASIC5.3□□□□□ -1.56
APOA1P02647 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
APOA1P02647 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC5.3□□□□□ -1.56
APOA1P02647 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.3□□□□□ -1.56
APOA1P02647 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOA1P02647 AC000089.1-201ENST00000424559 801 ntBASIC5.3□□□□□ -1.56
APOA1P02647 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.3□□□□□ -1.56
APOA1P02647 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.3□□□□□ -1.56
APOA1P02647 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.3□□□□□ -1.56
APOA1P02647 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.3□□□□□ -1.56
APOA1P02647 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC5.3□□□□□ -1.56
APOA1P02647 TCEA1P3-201ENST00000443005 880 ntBASIC5.3□□□□□ -1.56
APOA1P02647 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.3□□□□□ -1.56
APOA1P02647 RPS16P9-201ENST00000477220 427 ntBASIC5.3□□□□□ -1.56
APOA1P02647 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.3□□□□□ -1.56
APOA1P02647 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.3□□□□□ -1.56
APOA1P02647 RPL23AP40-201ENST00000487630 390 ntBASIC5.3□□□□□ -1.56
APOA1P02647 AC069304.1-201ENST00000491593 704 ntBASIC5.3□□□□□ -1.56
APOA1P02647 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
APOA1P02647 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.3□□□□□ -1.56
APOA1P02647 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
APOA1P02647 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.3□□□□□ -1.56
APOA1P02647 AC093591.2-201ENST00000565254 3843 ntBASIC5.3□□□□□ -1.56
APOA1P02647 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.3□□□□□ -1.56
APOA1P02647 AC004805.3-201ENST00000603178 310 ntBASIC5.3□□□□□ -1.56
APOA1P02647 AL121782.1-201ENST00000611242 413 ntBASIC5.3□□□□□ -1.56
APOA1P02647 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.3□□□□□ -1.56
APOA1P02647 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOA1P02647 AC022400.9-201ENST00000623633 273 ntBASIC5.3□□□□□ -1.56
APOA1P02647 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOA1P02647 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.3□□□□□ -1.56
APOA1P02647 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.3□□□□□ -1.56
APOA1P02647 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
APOA1P02647 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.3□□□□□ -1.56
APOA1P02647 NEAT1-202ENST00000501122 22743 ntBASIC5.3□□□□□ -1.56
APOA1P02647 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOA1P02647 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
APOA1P02647 AC019072.1-201ENST00000604535 1551 ntBASIC5.29□□□□□ -1.56
APOA1P02647 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.29□□□□□ -1.56
APOA1P02647 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 HSPD1P7-201ENST00000447985 1686 ntBASIC5.29□□□□□ -1.56
APOA1P02647 SNORD35A-201ENST00000363389 86 ntBASIC5.29□□□□□ -1.56
APOA1P02647 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
APOA1P02647 AL079341.1-201ENST00000404701 1207 ntBASIC5.29□□□□□ -1.56
APOA1P02647 SNORA79B-201ENST00000410557 148 ntBASIC5.29□□□□□ -1.56
APOA1P02647 RN7SKP166-201ENST00000410812 305 ntBASIC5.29□□□□□ -1.56
APOA1P02647 NPM1P48-201ENST00000436002 853 ntBASIC5.29□□□□□ -1.56
APOA1P02647 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.29□□□□□ -1.56
APOA1P02647 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.29□□□□□ -1.56
APOA1P02647 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.29□□□□□ -1.56
APOA1P02647 OR2A3P-201ENST00000493774 953 ntBASIC5.29□□□□□ -1.56
APOA1P02647 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.29□□□□□ -1.56
APOA1P02647 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.29□□□□□ -1.56
APOA1P02647 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.29□□□□□ -1.56
APOA1P02647 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.29□□□□□ -1.56
APOA1P02647 AC093878.1-201ENST00000515630 432 ntBASIC5.29□□□□□ -1.56
APOA1P02647 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.29□□□□□ -1.56
APOA1P02647 OR8A2P-201ENST00000528631 952 ntBASIC5.29□□□□□ -1.56
APOA1P02647 MIR4800-201ENST00000537353 80 ntBASIC5.29□□□□□ -1.56
APOA1P02647 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.29□□□□□ -1.56
APOA1P02647 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.29□□□□□ -1.56
APOA1P02647 AL358913.1-201ENST00000554342 121 ntBASIC5.29□□□□□ -1.56
APOA1P02647 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 BMS1P16-201ENST00000556075 1147 ntBASIC5.29□□□□□ -1.56
APOA1P02647 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
APOA1P02647 AL132640.2-202ENST00000559732 614 ntBASIC5.29□□□□□ -1.56
APOA1P02647 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.29□□□□□ -1.56
APOA1P02647 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
APOA1P02647 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
APOA1P02647 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.29□□□□□ -1.56
APOA1P02647 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.29□□□□□ -1.56
APOA1P02647 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.29□□□□□ -1.56
APOA1P02647 AL592504.1-201ENST00000605319 439 ntBASIC5.29□□□□□ -1.56
APOA1P02647 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.29□□□□□ -1.56
APOA1P02647 AC010320.5-201ENST00000619124 676 ntBASIC5.29□□□□□ -1.56
APOA1P02647 MIR6834-201ENST00000622807 81 ntBASIC5.29□□□□□ -1.56
APOA1P02647 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.29□□□□□ -1.56
APOA1P02647 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.29□□□□□ -1.56
APOA1P02647 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 CASC19-238ENST00000641523 1558 ntBASIC5.29□□□□□ -1.56
APOA1P02647 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOA1P02647 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
APOA1P02647 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
APOA1P02647 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOA1P02647 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOA1P02647 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.28□□□□□ -1.56
APOA1P02647 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.28□□□□□ -1.56
APOA1P02647 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOA1P02647 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
APOA1P02647 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.28□□□□□ -1.56
APOA1P02647 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.28□□□□□ -1.56
APOA1P02647 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
APOA1P02647 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOA1P02647 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms