Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RN7SKP17-201ENST00000411242 351 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC28A1O00337 RPL35AP31-201ENST00000418340 337 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC28A1O00337 PSMD10P2-201ENST00000432890 672 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 KATNBL1P2-201ENST00000433311 835 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 AC092601.1-201ENST00000444526 383 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 AC009963.4-201ENST00000448535 339 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC28A1O00337 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.8□□□□□ -1.48
SLC28A1O00337 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.8□□□□□ -1.48
SLC28A1O00337 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC007346.2-201ENST00000564816 892 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 MIR3157-201ENST00000578688 85 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 RN7SL66P-201ENST00000582099 264 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC28A1O00337 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC096861.1-201ENST00000616652 240 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SLC28A1O00337 SNX18P12-201ENST00000624821 759 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC099654.15-201ENST00000639802 509 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 AC239868.2-201ENST00000564237 4527 ntBASIC5.8□□□□□ -1.48
SLC28A1O00337 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC28A1O00337 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC28A1O00337 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC28A1O00337 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC28A1O00337 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC28A1O00337 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC28A1O00337 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC004656.1-201ENST00000568479 4951 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC28A1O00337 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SLC28A1O00337 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SLC28A1O00337 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC017078.1-201ENST00000416146 368 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 RPL7AP14-201ENST00000424041 802 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC28A1O00337 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC016027.4-201ENST00000450866 277 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 SDC4P-201ENST00000453285 601 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SLC28A1O00337 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC28A1O00337 RARRES2P3-201ENST00000457739 473 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 AC079080.1-201ENST00000479841 822 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 AC083795.1-201ENST00000491760 320 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC28A1O00337 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.79□□□□□ -1.48
SLC28A1O00337 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC28A1O00337 AP001542.1-201ENST00000591314 200 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC006115.2-201ENST00000596823 202 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.79□□□□□ -1.48
SLC28A1O00337 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.79□□□□□ -1.48
SLC28A1O00337 AL355974.3-201ENST00000617383 467 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.79□□□□□ -1.48
SLC28A1O00337 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 AL161756.3-201ENST00000641216 2071 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC130304.1-201ENST00000622942 2385 ntBASIC5.79□□□□□ -1.48
SLC28A1O00337 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SLC28A1O00337 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC28A1O00337 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.78□□□□□ -1.48
SLC28A1O00337 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SLC28A1O00337 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms