Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC119403.2-201ENST00000590960 598 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 MIR6823-201ENST00000622118 61 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 MAPK10-350ENST00000641777 965 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 SNORD1C-201ENST00000363315 78 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 RNU105B-201ENST00000364478 208 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 PRELID1P1-201ENST00000403549 660 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC245096.1-201ENST00000413104 546 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 MTND4LP21-201ENST00000415303 295 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 NPM1P36-201ENST00000415681 835 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AJ239321.1-201ENST00000424255 564 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC021876.1-201ENST00000425959 359 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AL590399.2-201ENST00000427536 309 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 RPL12P16-201ENST00000431098 498 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 RPL17P35-201ENST00000432217 549 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC245291.3-201ENST00000443400 292 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 CYCSP53-201ENST00000455540 265 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 RN7SL393P-201ENST00000463588 296 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC090589.1-201ENST00000473109 362 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 RPS4XP17-201ENST00000479057 754 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC018639.1-201ENST00000492994 442 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 OR2A3P-201ENST00000493774 953 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 HMGN1P16-201ENST00000508308 283 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF519P4-201ENST00000514008 125 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC117525.1-201ENST00000515228 503 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 OR4A46P-201ENST00000527255 933 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 OR4A42P-201ENST00000531397 938 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 HNRNPCP1-201ENST00000556181 766 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 NPM1P42-201ENST00000560329 862 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AL391001.1-201ENST00000602747 715 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 SMIM12P1-201ENST00000603004 274 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AP001823.1-201ENST00000604056 1003 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 AC024933.1-201ENST00000608472 348 ntBASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.15□□□□□ -1.42
TCRBV7S3A2A0A539 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.15□□□□□ -1.43
TCRBV7S3A2A0A539 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 RNU6-386P-201ENST00000362650 107 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AL133260.1-201ENST00000405720 405 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 RN7SKP166-201ENST00000410812 305 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 VN1R20P-201ENST00000425215 966 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AL445528.1-201ENST00000426330 420 ntBASIC6.14□□□□□ -1.43
TCRBV7S3A2A0A539 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms