Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 GCNT1P4-201ENST00000404096 329 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AL451046.1-201ENST00000406097 534 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 RPS15AP30-201ENST00000420976 390 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 RPL23AP60-201ENST00000450011 454 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC002553.3-201ENST00000453002 341 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 RAB28P2-201ENST00000454299 641 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 CYP4F27P-201ENST00000514557 494 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 CR383658.1-201ENST00000514609 734 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC007494.1-201ENST00000562293 760 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC002310.3-201ENST00000569728 723 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 GLYATL1P2-202ENST00000588046 902 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC124916.2-201ENST00000604416 224 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AL499605.1-201ENST00000604628 403 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AL162377.2-201ENST00000624532 337 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC093297.3-201ENST00000607056 2517 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 RNU105B-201ENST00000364478 208 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AL132875.1-201ENST00000403623 949 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 PTCD2P2-201ENST00000415579 1095 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC017078.1-201ENST00000416146 368 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 RPL35AP31-201ENST00000418340 337 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC130360.1-201ENST00000425489 1117 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 GAPDHP34-201ENST00000432112 823 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC007679.3-201ENST00000434035 414 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 NPM1P48-201ENST00000436002 853 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC023141.3-201ENST00000436698 278 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AL138899.2-201ENST00000439139 499 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 SEPT14P12-201ENST00000442280 560 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 ZNF619P1-201ENST00000446539 752 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 OR52I1-201ENST00000450052 1050 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 PPIAP7-201ENST00000454070 489 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 RN7SL352P-201ENST00000466002 277 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 SLC25A51P1-201ENST00000468432 871 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 RPL5P16-201ENST00000471467 790 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AL035690.1-201ENST00000490892 383 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC130365.2-201ENST00000525882 1201 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AP000620.1-201ENST00000527147 504 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 TOMM20P1-201ENST00000534518 427 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC134669.1-201ENST00000581275 672 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC004890.3-201ENST00000605566 1095 ntBASIC5.76□□□□□ -1.49
ATG4BQ9Y4P1 AC073389.3-201ENST00000609434 935 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms