Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC006115.2-201ENST00000596823 202 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AL137067.2-201ENST00000621202 131 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC007347.2-201ENST00000623044 180 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC099654.15-201ENST00000639802 509 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC079776.5-201ENST00000641920 211 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AL136984.1-201ENST00000607611 1893 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC093591.2-201ENST00000565254 3843 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC123912.3-201ENST00000600907 1367 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AL929601.4-201ENST00000613011 1341 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC019178.1-201ENST00000392337 440 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 EEF1GP6-201ENST00000402309 905 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 VIM2P-201ENST00000402383 1294 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 PTCD2P2-201ENST00000415579 1095 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AL020997.1-201ENST00000446554 349 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AL121578.2-201ENST00000448797 447 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AL133480.2-201ENST00000456723 487 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 RPL12P24-201ENST00000474907 486 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC114940.1-201ENST00000512162 1265 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC093816.1-201ENST00000515076 913 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC244502.2-201ENST00000543361 851 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC092865.1-201ENST00000544395 1023 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC068993.1-201ENST00000546724 589 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC007346.2-201ENST00000564816 892 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC010547.7-201ENST00000570323 333 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 MIR4312-201ENST00000579909 76 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AL035417.2-201ENST00000603887 796 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC073046.2-201ENST00000604756 527 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC022960.2-201ENST00000616300 666 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC024884.1-201ENST00000620583 399 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC008079.2-201ENST00000623543 20396 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 AC005224.3-201ENST00000584683 2140 ntBASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.05□□□□□ -1.6
KCNIP3Q9Y2W7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 CASC19-248ENST00000641674 1356 ntBASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 AC114774.1-201ENST00000507410 1770 ntBASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 AL445213.1-201ENST00000412589 747 ntBASIC5.04□□□□□ -1.6
KCNIP3Q9Y2W7 MYL6P5-201ENST00000412707 459 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms