Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 AC093849.1-201ENST00000563631 2209 ntBASIC5.41□□□□□ -1.54
COPS3Q9UNS2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 KYNUP3-201ENST00000574386 1341 ntBASIC5.41□□□□□ -1.54
COPS3Q9UNS2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COPS3Q9UNS2 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.41□□□□□ -1.54
COPS3Q9UNS2 AC016583.1-201ENST00000624221 2431 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AL161756.3-201ENST00000641216 2071 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC079248.1-201ENST00000427568 1546 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 ZNF37CP-201ENST00000406795 241 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AL512593.1-201ENST00000444758 779 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 NPM1P9-201ENST00000453156 844 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 RN7SL267P-201ENST00000485107 261 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC124945.1-201ENST00000485133 188 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 TOMM22P4-201ENST00000511318 336 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC136777.2-201ENST00000522979 358 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC084851.2-201ENST00000530377 364 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AP001357.1-201ENST00000586304 1053 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC139792.1-201ENST00000607051 647 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 MIR6883-201ENST00000614952 78 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 AC068213.1-201ENST00000625124 226 ntBASIC5.4□□□□□ -1.54
COPS3Q9UNS2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.4□□□□□ -1.54
COPS3Q9UNS2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 HCFC2P1-201ENST00000392864 1592 ntBASIC5.4□□□□□ -1.55
COPS3Q9UNS2 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 AL603750.1-201ENST00000624216 1717 ntBASIC5.4□□□□□ -1.55
COPS3Q9UNS2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COPS3Q9UNS2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 MIR1266-201ENST00000408125 84 ntBASIC5.39□□□□□ -1.55
COPS3Q9UNS2 AC017078.1-201ENST00000416146 368 ntBASIC5.39□□□□□ -1.55
COPS3Q9UNS2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 OSTCP4-201ENST00000424397 449 ntBASIC5.39□□□□□ -1.55
COPS3Q9UNS2 OR6R1P-201ENST00000431838 940 ntBASIC5.39□□□□□ -1.55
COPS3Q9UNS2 CXCR2P1-202ENST00000443392 1074 ntBASIC5.39□□□□□ -1.55
COPS3Q9UNS2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.39□□□□□ -1.55
COPS3Q9UNS2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms