Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AC012254.3-201ENST00000591183 2117 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AL161756.3-201ENST00000641216 2071 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AC009831.5-201ENST00000624000 3189 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AC011933.2-201ENST00000578539 2790 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AC023490.2-201ENST00000359859 470 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 RN7SKP77-201ENST00000363261 353 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 PCBP2P1-201ENST00000437262 977 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AC079922.1-201ENST00000443291 359 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 AP001823.1-201ENST00000604056 1003 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.74□□□□□ -1.49
CCDC88CQ9P219 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC88CQ9P219 ABCA11P-202ENST00000504019 2110 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AF287957.1-201ENST00000607368 1595 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AC114876.1-201ENST00000490962 1366 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AL512422.1-201ENST00000407033 553 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AC023141.3-201ENST00000436698 278 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AP006222.1-205ENST00000450734 457 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 RPL7L1P3-201ENST00000455249 689 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 RNA5SP438-201ENST00000516561 112 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AC073916.1-201ENST00000545095 130 ntBASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC88CQ9P219 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 MAPK10-261ENST00000641050 3109 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 RN7SKP166-201ENST00000410812 305 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 RPS17P17-201ENST00000419392 409 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 GEMIN2P1-201ENST00000454246 752 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 RPS26P39-201ENST00000469206 341 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 RPSAP37-201ENST00000470913 821 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC093719.1-201ENST00000480427 441 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 AC104109.1-201ENST00000498563 436 ntBASIC5.72□□□□□ -1.49
CCDC88CQ9P219 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC88CQ9P219 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms