Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 RNU1-134P-201ENST00000362935 165 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 SNORA51.9-201ENST00000384295 124 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AL132875.1-201ENST00000403623 949 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 PNKDP1-201ENST00000435914 430 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 RAB9AP5-201ENST00000437794 597 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 RAB9AP2-201ENST00000443911 597 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AL162739.1-201ENST00000450606 307 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 SDC4P-201ENST00000453285 601 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC002075.1-201ENST00000457396 676 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 RN7SL352P-201ENST00000466002 277 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC021006.1-201ENST00000489849 553 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 OR52A4P-203ENST00000498233 1014 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AP001804.1-201ENST00000526868 919 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC007346.1-201ENST00000569208 867 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AL645933.2-201ENST00000606743 1207 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AC114876.1-201ENST00000490962 1366 ntBASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
BLOC1S4Q9NUP1 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC034229.2-201ENST00000566945 2508 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 RN7SKP166-201ENST00000410812 305 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AL353662.1-201ENST00000439099 327 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 EEF1B2P3-201ENST00000447718 678 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC016027.4-201ENST00000450866 277 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 RPL23AP40-201ENST00000487630 390 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AL158068.1-201ENST00000506116 616 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC009879.1-201ENST00000520029 839 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC008126.1-201ENST00000549019 480 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC002519.2-203ENST00000567043 837 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AL683826.1-201ENST00000624104 627 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AC073488.3-201ENST00000631611 778 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 AL596275.2-207ENST00000641188 675 ntBASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
BLOC1S4Q9NUP1 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms