Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 AC005224.3-201ENST00000584683 2140 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 RNA5SP477-201ENST00000362639 119 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 RN7SKP128-201ENST00000364270 303 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 AC016739.1-201ENST00000405359 345 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 MTND4LP17-201ENST00000414607 293 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 BX284632.2-201ENST00000421091 399 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 AC115283.1-201ENST00000427353 400 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 TUBB4BP6-201ENST00000437576 479 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 AL512605.1-202ENST00000441919 381 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 AL359955.2-201ENST00000445380 353 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 TRBV5-2-201ENST00000489095 273 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 SETP21-201ENST00000514799 892 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 RN7SKP70-201ENST00000516655 271 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 WBP1LP3-201ENST00000523033 208 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 GARSP1-201ENST00000570895 719 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 AL445670.1-201ENST00000618889 801 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CISHQ9NSE2 PARP4P2-201ENST00000446672 3326 ntBASIC6.32□□□□□ -1.4
CISHQ9NSE2 AP004289.1-201ENST00000436307 2205 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 AC027088.4-201ENST00000611559 1947 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 TMSB4XP2-201ENST00000335179 210 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 RPS26P38-201ENST00000414476 348 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 RPS3AP38-201ENST00000435889 763 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 Y_RNA.667-201ENST00000516212 107 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 RNA5SP438-201ENST00000516561 112 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 AC007346.2-201ENST00000564816 892 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 AC145423.1-201ENST00000605712 336 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.31□□□□□ -1.4
CISHQ9NSE2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CISHQ9NSE2 AC034229.2-201ENST00000566945 2508 ntBASIC6.31□□□□□ -1.4
CISHQ9NSE2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 GNG5P2-201ENST00000372054 207 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 SUGT1P2-201ENST00000379452 992 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 SNORA70.9-201ENST00000384370 135 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 RN7SKP240-201ENST00000410583 375 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AC066692.1-201ENST00000421721 457 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 AK3P5-201ENST00000432033 519 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 NDUFS5P5-201ENST00000437256 321 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AL359839.1-201ENST00000451975 1160 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 PFN1P8-201ENST00000497012 543 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms