Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNBIP1Q9NSA3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 CDC27P2-201ENST00000425026 1922 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RNU6-249P-201ENST00000363016 102 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RNU105B-201ENST00000364478 208 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RNA5SP485-201ENST00000365053 119 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RPL11P3-201ENST00000395256 523 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 VIM2P-201ENST00000402383 1294 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 DHFRP2-201ENST00000414224 547 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 HIGD1AP16-201ENST00000450986 258 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RSU1P1-201ENST00000453416 441 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RPL5P33-201ENST00000487833 905 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 PDCL3P4-201ENST00000489621 720 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 GM2AP2-201ENST00000491764 562 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RN7SL284P-201ENST00000498823 275 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC093664.1-201ENST00000511779 289 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RPL41P2-201ENST00000544920 409 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 NPM1P5-201ENST00000557228 838 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 MIR6811-201ENST00000620409 58 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AC004076.2-201ENST00000620532 3323 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 FANCD2P2-201ENST00000437591 1400 ntBASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNBIP1Q9NSA3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 AC140134.1-201ENST00000511830 3544 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 RNA5SP453-201ENST00000362503 119 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 RNA5SP346-201ENST00000363541 121 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 RN7SKP144-201ENST00000411108 279 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 RPS15AP30-201ENST00000420976 390 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 AC002127.1-201ENST00000421305 225 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 AL158214.1-201ENST00000444423 404 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 OR2L9P-201ENST00000444456 913 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 AL354872.1-201ENST00000456361 967 ntBASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNBIP1Q9NSA3 AC009567.2-201ENST00000502989 349 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms