Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNY4P34-201ENST00000364779 95 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AIF1L-202ENST00000372297 418 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 RN7SKP139-201ENST00000410411 293 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 SLC25A5P4-201ENST00000418448 869 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AP002383.1-201ENST00000439405 720 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 RPL36AP15-201ENST00000444514 266 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 RPSAP76-201ENST00000444599 853 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 HAUS6P3-201ENST00000456660 1107 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 RPL12P8-201ENST00000482081 580 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 CCDC58-206ENST00000497726 438 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC117522.1-201ENST00000509821 380 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 MAST4-IT1-201ENST00000514241 658 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 GABRP-207ENST00000519598 1284 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC005842.1-201ENST00000537149 678 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AL512310.1-201ENST00000548639 172 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AL355922.3-201ENST00000556341 578 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AP001357.2-201ENST00000586758 710 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AP000907.4-201ENST00000604143 237 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC007363.1-201ENST00000604736 620 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC018695.5-201ENST00000605872 315 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 PACERR-201ENST00000608917 825 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC092954.2-201ENST00000609103 430 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AL359314.1-201ENST00000616913 261 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 AC093495.1-214ENST00000627116 559 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CASC19-221ENST00000641309 1382 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC027613.1-202ENST00000513136 1957 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC016583.1-201ENST00000624221 2431 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 RN7SKP294-201ENST00000362770 338 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 Y_RNA.303-201ENST00000364998 94 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 REG3A-202ENST00000393878 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AL031679.1-201ENST00000400616 525 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CCNG1P1-201ENST00000406783 885 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 RPL6P29-201ENST00000414863 865 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 FAM180A-202ENST00000415751 1073 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AL109913.1-201ENST00000421173 514 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AL139246.3-201ENST00000424215 626 ntTSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 FAF2P1-201ENST00000429974 1298 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 IGLV3-4-201ENST00000432300 244 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 RPL5P4-201ENST00000434805 886 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CBX1P1-201ENST00000440184 427 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 COX5BP6-201ENST00000454311 211 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 SEPT7P3-201ENST00000455017 621 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 RPL31P50-201ENST00000471002 296 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 RN7SL535P-201ENST00000479087 296 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 RN7SL169P-201ENST00000485643 289 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 RN7SL37P-201ENST00000490461 307 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC003029.1-201ENST00000493495 603 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC022861.1-201ENST00000522981 663 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC109635.3-201ENST00000529536 185 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC068305.3-201ENST00000547590 555 ntTSL 4 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 MIR4695-201ENST00000577305 74 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC10.03□□□□□ -0.8
RTN4Q9NQC3 AC090312.1-201ENST00000580637 348 ntBASIC10.03□□□□□ -0.8
RTN4Q9NQC3 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 316.7 ms