Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC004223.4-201ENST00000612426 332 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC012676.3-201ENST00000614983 479 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC124312.6-202ENST00000623624 418 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AC120057.5-201ENST00000623840 154 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 AL008636.1-201ENST00000625038 1018 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 AL590396.3-201ENST00000636334 300 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 ZNF833P-201ENST00000424938 1494 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 MAPK10-357ENST00000641831 2858 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSU72Q9NP77 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 SAMMSON-203ENST00000641005 2168 ntBASIC7.08□□□□□ -1.28
SSU72Q9NP77 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.08□□□□□ -1.28
SSU72Q9NP77 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 BRD7P1-201ENST00000557705 1915 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 NCLP2-201ENST00000416078 1462 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 RNA5SP172-201ENST00000365061 118 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 Y_RNA.560-201ENST00000384689 102 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 CTSLP8-201ENST00000413075 967 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 BMP2KL-201ENST00000414251 1225 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AL591438.2-201ENST00000452635 691 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 RPL7P32-201ENST00000457119 744 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC107015.1-201ENST00000466902 747 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 CCDC75P1-201ENST00000469247 791 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 RPL30P6-201ENST00000475925 342 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC114300.1-201ENST00000502347 280 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 HIGD1AP10-201ENST00000527837 282 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC144548.1-201ENST00000549577 324 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 EEF1B2P1-201ENST00000567221 672 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC005726.4-201ENST00000582858 458 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC083760.1-201ENST00000589621 670 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AL137190.1-201ENST00000603288 282 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AL390058.1-201ENST00000603834 629 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC063962.1-201ENST00000608199 521 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC006335.3-201ENST00000613408 292 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 AC243830.2-201ENST00000618067 630 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.07□□□□□ -1.28
SSU72Q9NP77 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.07□□□□□ -1.28
SSU72Q9NP77 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SSU72Q9NP77 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSU72Q9NP77 MTCO1P28-201ENST00000574177 1528 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms