Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC097063.1-201ENST00000426714 1797 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 QRSL1P3-201ENST00000552666 1316 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 SNORA43.1-201ENST00000364863 140 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 RNA5SP302-201ENST00000364896 100 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ADAM24P-201ENST00000398655 2101 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 VIM2P-201ENST00000402383 1294 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 RPL12P23-201ENST00000405880 490 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 SNORA77.2-201ENST00000408571 112 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC138761.5-201ENST00000433967 325 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC099670.2-201ENST00000435130 321 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 SNRPFP2-201ENST00000440710 251 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 RPL23AP60-201ENST00000450011 454 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 RN7SL70P-201ENST00000478322 302 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ASNSP4-201ENST00000511103 447 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 IGHV4-55-201ENST00000520889 368 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 RBMS2P1-201ENST00000525031 1226 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 VDAC2P2-201ENST00000544463 901 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ZNF322P1-201ENST00000568013 1209 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC133552.4-201ENST00000576103 676 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 MIR4258-201ENST00000580920 91 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC005224.3-201ENST00000584683 2140 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AL354950.1-201ENST00000614150 568 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AL137067.2-201ENST00000621202 131 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 OR7A1P-202ENST00000641542 1158 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 MUC2-202ENST00000613187 4845 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC112198.2-201ENST00000426589 6996 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 MTCO1P28-201ENST00000574177 1528 ntBASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 OR7A2P-201ENST00000304105 930 ntBASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 RNA5SP429-201ENST00000363688 109 ntBASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 RNU1-84P-201ENST00000365447 164 ntBASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 SNORA5.1-201ENST00000384275 131 ntBASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 RPL11P3-201ENST00000395256 523 ntBASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 RN7SKP221-201ENST00000410420 301 ntBASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 RNU2-22P-201ENST00000411266 212 ntBASIC4.01□□□□□ -1.77
SND1-IT1Q9HBX3 AC117434.1-201ENST00000419971 836 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms