Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 MIR4502-201ENST00000580432 81 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AL499605.1-201ENST00000604628 403 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AC063952.1-203ENST00000634410 658 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 RBPJP7-201ENST00000442803 1447 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 RBPJP5-201ENST00000449433 1447 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC137056.2-201ENST00000624055 1958 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 SNORA51.9-201ENST00000384295 124 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 MIR621-201ENST00000384919 96 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 SNORA11.5-201ENST00000408163 128 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC092651.1-201ENST00000426110 312 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 PNKDP1-201ENST00000435914 430 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AL445466.1-201ENST00000448432 357 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 RN7SKP288-201ENST00000516227 268 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC011853.1-201ENST00000518911 454 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC002310.3-201ENST00000569728 723 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC134669.1-201ENST00000581275 672 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC006115.2-201ENST00000596823 202 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 AC092681.3-201ENST00000609463 678 ntBASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCSER1Q9C0I3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCSER1Q9C0I3 AC099654.3-201ENST00000447087 1546 ntBASIC6.71□□□□□ -1.33
CCSER1Q9C0I3 AL354854.1-201ENST00000455940 1363 ntBASIC6.71□□□□□ -1.33
CCSER1Q9C0I3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCSER1Q9C0I3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.71□□□□□ -1.33
CCSER1Q9C0I3 AC008627.1-201ENST00000517511 1704 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC099677.3-201ENST00000427081 395 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 RPL34P27-201ENST00000428810 349 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC073410.1-201ENST00000435125 589 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC023245.1-201ENST00000468501 517 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC092865.4-201ENST00000477936 615 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 PFN1P8-201ENST00000497012 543 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 snoU109.5-201ENST00000516231 132 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 RN7SKP35-201ENST00000517210 151 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AP005119.1-201ENST00000580956 292 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 SNX18P12-201ENST00000624821 759 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC139426.3-201ENST00000605648 2059 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AL161756.3-201ENST00000641216 2071 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AL731532.1-201ENST00000623972 4236 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 AC104966.1-201ENST00000467010 1464 ntBASIC6.71□□□□□ -1.34
CCSER1Q9C0I3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms