Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC087516.1-201ENST00000561236 2428 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC020656.2-201ENST00000613291 5309 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC024587.1-201ENST00000505925 2157 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 RNA5SP279-201ENST00000365513 117 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 RBBP4P5-201ENST00000398583 1266 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 AL731534.1-201ENST00000434711 269 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 OR3D1P-201ENST00000438288 955 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC090958.1-201ENST00000511122 351 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 HMGN1P17-201ENST00000513734 295 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 MAST4-IT1-201ENST00000514241 658 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC004232.2-201ENST00000574245 821 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 AP001357.1-201ENST00000586304 1053 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC009779.8-202ENST00000607990 932 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC022106.1-201ENST00000612834 766 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC111152.1-202ENST00000635848 339 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 AL357140.4-201ENST00000636827 412 ntBASIC5.72□□□□□ -1.49
COL21A1Q96P44 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL21A1Q96P44 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL21A1Q96P44 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
COL21A1Q96P44 AL049634.1-201ENST00000453770 1720 ntBASIC5.71□□□□□ -1.49
COL21A1Q96P44 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL21A1Q96P44 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
COL21A1Q96P44 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL21A1Q96P44 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL21A1Q96P44 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL21A1Q96P44 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AL035422.1-201ENST00000414193 397 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 AL354868.1-201ENST00000417077 482 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 PSMD10P2-201ENST00000432890 672 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 AC010240.2-201ENST00000445363 1205 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 AL590004.3-202ENST00000445883 451 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 HMGB1P7-201ENST00000450921 612 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 RN7SL352P-201ENST00000466002 277 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 TPM3P3-201ENST00000521343 354 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AP005136.2-201ENST00000583253 1049 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AL591167.1-201ENST00000607321 456 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 MIR6780B-201ENST00000610307 79 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 MIR6806-201ENST00000622141 64 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL21A1Q96P44 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 AL355488.2-201ENST00000609909 2850 ntBASIC5.71□□□□□ -1.5
COL21A1Q96P44 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL21A1Q96P44 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL21A1Q96P44 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL21A1Q96P44 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
COL21A1Q96P44 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL21A1Q96P44 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL21A1Q96P44 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL21A1Q96P44 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL21A1Q96P44 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL21A1Q96P44 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 RNU6-316P-201ENST00000391027 107 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 AK3P5-201ENST00000432033 519 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC093166.3-201ENST00000448785 303 ntBASIC5.7□□□□□ -1.5
COL21A1Q96P44 AC118758.1-202ENST00000454719 225 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms