Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC104164.1-201ENST00000460282 590 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 SNRPCP3-201ENST00000474888 476 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 AC117500.1-201ENST00000497352 755 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 AC093325.1-201ENST00000508378 326 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 SNORA74.1-201ENST00000516320 180 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC42Q96M95 OR7E158P-201ENST00000524483 910 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC42Q96M95 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC42Q96M95 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC42Q96M95 AL513327.3-201ENST00000602618 469 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 AL645933.2-201ENST00000606743 1207 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 U91328.4-201ENST00000608919 517 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 BCORP1-203ENST00000513194 5093 ntBASIC6.39□□□□□ -1.39
CCDC42Q96M95 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC42Q96M95 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC42Q96M95 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CCDC42Q96M95 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC42Q96M95 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 RNA5SP231-201ENST00000410496 138 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 NFU1P1-201ENST00000413128 774 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL590004.3-202ENST00000445883 451 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 RBMY2HP-201ENST00000457961 720 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 RN7SL393P-201ENST00000463588 296 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 RPL38P3-201ENST00000484463 213 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 OR4A42P-201ENST00000531397 938 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL121594.2-201ENST00000541658 472 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AC126615.2-201ENST00000553003 515 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 AC125494.2-201ENST00000602431 657 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL583832.1-201ENST00000603227 784 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL512413.1-201ENST00000606489 382 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL445670.1-201ENST00000618889 801 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AC089999.3-201ENST00000622440 577 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AC079776.5-201ENST00000641920 211 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 CAP1P2-201ENST00000417455 1409 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL049634.1-201ENST00000453770 1720 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 GTF2IP4-201ENST00000453092 2054 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 AL161912.4-201ENST00000623889 2468 ntBASIC6.38□□□□□ -1.39
CCDC42Q96M95 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC42Q96M95 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC42Q96M95 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC42Q96M95 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC42Q96M95 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 AC114774.1-201ENST00000507410 1770 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC42Q96M95 RBMY1HP-201ENST00000382759 1389 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 RNA5SP453-201ENST00000362503 119 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC42Q96M95 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC42Q96M95 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC42Q96M95 PSMD8P1-201ENST00000436275 769 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 AC010086.1-201ENST00000437359 1052 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 AL663074.2-201ENST00000440621 479 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 AC234771.2-201ENST00000445718 597 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 RPS18P1-201ENST00000447840 458 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 AC097359.1-201ENST00000447946 463 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 MIR2117-201ENST00000516780 80 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC42Q96M95 OR8Q1P-201ENST00000526467 655 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 AC036111.2-201ENST00000533247 901 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 AP005136.2-201ENST00000583253 1049 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC42Q96M95 RPSAP75-201ENST00000605848 301 ntBASIC6.37□□□□□ -1.39
CCDC42Q96M95 AC211486.4-201ENST00000621495 113 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms