Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 AC004232.2-201ENST00000574245 821 ntBASIC6.2□□□□□ -1.42
C9orf72Q96LT7 MIR4502-201ENST00000580432 81 ntBASIC6.2□□□□□ -1.42
C9orf72Q96LT7 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 AC141002.1-201ENST00000607025 279 ntBASIC6.2□□□□□ -1.42
C9orf72Q96LT7 MIR6071-201ENST00000616741 78 ntBASIC6.2□□□□□ -1.42
C9orf72Q96LT7 AC099654.11-201ENST00000638857 294 ntBASIC6.2□□□□□ -1.42
C9orf72Q96LT7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C9orf72Q96LT7 AC016583.1-201ENST00000624221 2431 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 RNA5SP514-201ENST00000363717 111 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AL139805.1-201ENST00000407837 289 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 NME1P1-201ENST00000420914 382 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC092865.3-201ENST00000425390 1026 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 PSMD10P2-201ENST00000432890 672 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AL133351.3-201ENST00000454998 193 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 RN7SL254P-201ENST00000460609 284 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC128716.1-201ENST00000475129 166 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 HMGN1P17-201ENST00000513734 295 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC005363.1-201ENST00000530779 351 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC002519.2-203ENST00000567043 837 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC008555.7-201ENST00000605008 583 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 SNORA74.4-201ENST00000607595 199 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC009120.7-201ENST00000623452 780 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
C9orf72Q96LT7 AC005224.3-201ENST00000584683 2140 ntBASIC6.19□□□□□ -1.42
C9orf72Q96LT7 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 DNM1P47-203ENST00000571780 12667 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AL355834.1-201ENST00000556602 3965 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 RNA5SP346-201ENST00000363541 121 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AL157702.1-201ENST00000398764 426 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 SNORA11.3-201ENST00000408471 128 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AL035422.1-201ENST00000414193 397 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 CXCR2P1-202ENST00000443392 1074 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AL512593.1-201ENST00000444758 779 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 RPL23AP60-201ENST00000450011 454 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 HMGB1P7-201ENST00000450921 612 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC093719.1-201ENST00000480427 441 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 PPP1R11P1-201ENST00000486095 376 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 ST13P12-201ENST00000508958 1094 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms