Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL132656.3-201ENST00000606384 1595 ntBASIC6.98□□□□□ -1.29
HPS3Q969F9 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.98□□□□□ -1.29
HPS3Q969F9 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HPS3Q969F9 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HPS3Q969F9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HPS3Q969F9 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.98□□□□□ -1.29
HPS3Q969F9 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HPS3Q969F9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC119674.1-213ENST00000641177 1386 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
HPS3Q969F9 AOX3P-204ENST00000491025 2107 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.97□□□□□ -1.29
HPS3Q969F9 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 MIR421-201ENST00000365696 85 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 ST13P16-201ENST00000401760 781 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 RN7SKP161-201ENST00000411110 305 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 TMA16P2-201ENST00000413187 601 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 RPL24P2-201ENST00000421023 475 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AL139184.1-202ENST00000422303 222 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AC125238.2-201ENST00000430003 1440 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AC245291.3-201ENST00000443400 292 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.97□□□□□ -1.29
HPS3Q969F9 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC019084.1-201ENST00000457337 432 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.97□□□□□ -1.29
HPS3Q969F9 MTND6P8-201ENST00000503471 522 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 HMGN1P15-201ENST00000513870 295 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC116917.1-201ENST00000520558 305 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.97□□□□□ -1.29
HPS3Q969F9 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.97□□□□□ -1.29
HPS3Q969F9 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.97□□□□□ -1.29
HPS3Q969F9 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.97□□□□□ -1.29
HPS3Q969F9 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC009779.8-202ENST00000607990 932 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AL352984.2-201ENST00000611153 546 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AC015819.1-201ENST00000613588 663 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 AL122023.1-201ENST00000622847 530 ntBASIC6.97□□□□□ -1.29
HPS3Q969F9 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HPS3Q969F9 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.97□□□□□ -1.29
HPS3Q969F9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HPS3Q969F9 AC018717.1-201ENST00000457712 1505 ntBASIC6.96□□□□□ -1.29
HPS3Q969F9 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.96□□□□□ -1.29
HPS3Q969F9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.96□□□□□ -1.29
HPS3Q969F9 AC005261.6-201ENST00000623072 1387 ntBASIC6.96□□□□□ -1.29
HPS3Q969F9 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.96□□□□□ -1.29
HPS3Q969F9 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HPS3Q969F9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
HPS3Q969F9 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.96□□□□□ -1.29
HPS3Q969F9 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HPS3Q969F9 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.96□□□□□ -1.29
HPS3Q969F9 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
HPS3Q969F9 SMG1P5-202ENST00000529428 4219 ntBASIC6.96□□□□□ -1.29
HPS3Q969F9 SMG1P2-201ENST00000566127 4221 ntBASIC6.96□□□□□ -1.29
HPS3Q969F9 AC130360.2-201ENST00000533477 1556 ntBASIC6.96□□□□□ -1.29
HPS3Q969F9 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HPS3Q969F9 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HPS3Q969F9 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HPS3Q969F9 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 RNA5SP485-201ENST00000365053 119 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 SNORD51.1-201ENST00000365405 77 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 MIR433-201ENST00000384837 93 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 MIR621-201ENST00000384919 96 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC116036.1-201ENST00000412199 367 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC019205.1-201ENST00000421830 730 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.96□□□□□ -1.3
HPS3Q969F9 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC112492.2-201ENST00000432774 1030 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 OR2L9P-201ENST00000444456 913 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AL445991.1-201ENST00000450381 475 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AL133351.3-201ENST00000454998 193 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC073594.1-201ENST00000462065 364 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 RN7SL393P-201ENST00000463588 296 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.96□□□□□ -1.3
HPS3Q969F9 GUSBP9-201ENST00000510138 584 ntBASIC6.96□□□□□ -1.3
HPS3Q969F9 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HPS3Q969F9 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.96□□□□□ -1.3
HPS3Q969F9 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms