Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTP4A1Q93096 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 RNU11-6P-201ENST00000391127 133 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC245036.1-201ENST00000391727 309 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AL139039.2-201ENST00000407436 479 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AL139184.1-202ENST00000422303 222 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC234771.4-201ENST00000441416 730 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 RPL31P20-201ENST00000449593 360 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 VPS25P1-201ENST00000455691 508 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 RPS3AP49-201ENST00000472161 790 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 SNORA70.17-201ENST00000516449 133 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 COX6B1P4-201ENST00000519826 484 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC009879.1-201ENST00000520029 839 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 RN7SL475P-201ENST00000583379 298 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 RPL29P33-201ENST00000587474 316 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AL589863.1-201ENST00000595383 631 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 LINC02495-203ENST00000636704 242 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTP4A1Q93096 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTP4A1Q93096 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 AC010266.2-201ENST00000564741 3255 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTP4A1Q93096 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 RPL31P11-201ENST00000426558 1558 ntBASIC5.67□□□□□ -1.5
PTP4A1Q93096 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
PTP4A1Q93096 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 TTC39DP-201ENST00000416781 1688 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AP001541.1-201ENST00000623322 1904 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC016745.2-201ENST00000608834 3443 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC010894.1-201ENST00000313760 361 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 RNA5SP308-201ENST00000362532 115 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 RNU6-819P-201ENST00000364116 107 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 MIR433-201ENST00000384837 93 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL121835.1-201ENST00000404250 354 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 RN7SKP151-201ENST00000410230 316 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC006509.1-201ENST00000420788 634 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL157884.1-201ENST00000424561 454 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC083855.1-201ENST00000440041 258 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 WDR82P2-201ENST00000444540 928 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL020997.1-201ENST00000446554 349 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 RN7SL83P-201ENST00000468131 297 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AP003385.3-201ENST00000472498 287 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC005519.1-201ENST00000554490 601 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 MIR4675-201ENST00000577898 77 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 NPIPB1P-202ENST00000588786 828 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC036176.3-201ENST00000602456 418 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC073046.2-201ENST00000604756 527 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC022001.1-201ENST00000605193 268 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms