Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MIR1266-201ENST00000408125 84 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 RN7SKP121-201ENST00000410842 305 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 RPL21P50-201ENST00000417698 477 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 NPM1P9-201ENST00000453156 844 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 RPL31P11-202ENST00000454082 372 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 RARRES2P3-201ENST00000457739 473 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC108751.3-201ENST00000461814 1020 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 RN7SL643P-201ENST00000471845 291 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 TRBV8-1-201ENST00000481590 279 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 RNA5SP206-201ENST00000516703 121 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC027176.2-201ENST00000559166 746 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 CCDC58P1-201ENST00000578567 430 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 DYNLL1P1-201ENST00000595442 269 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC036176.3-201ENST00000602456 418 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC004890.3-201ENST00000605566 1095 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AL591167.1-201ENST00000607321 456 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC090912.3-201ENST00000609775 533 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC022106.1-201ENST00000612834 766 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC109809.1-201ENST00000619665 545 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AL138955.1-201ENST00000622881 1040 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC091059.2-201ENST00000623355 614 ntBASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ATG4AQ8WYN0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC107977.1-201ENST00000355745 939 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC092651.1-201ENST00000426110 312 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC112492.2-201ENST00000432774 1030 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL645939.3-201ENST00000435408 225 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 GAPDHP23-201ENST00000444823 993 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 EIF2S2P5-201ENST00000457635 968 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 OR9N1P-201ENST00000491296 333 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC015524.1-201ENST00000491585 472 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AP001858.2-201ENST00000536213 601 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AC015911.5-201ENST00000587076 451 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL390877.1-201ENST00000605704 214 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AL445493.3-201ENST00000619568 477 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 AP006248.3-201ENST00000623580 594 ntBASIC6.4□□□□□ -1.38
ATG4AQ8WYN0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4AQ8WYN0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4AQ8WYN0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4AQ8WYN0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4AQ8WYN0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.4□□□□□ -1.39
ATG4AQ8WYN0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.4□□□□□ -1.39
ATG4AQ8WYN0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
ATG4AQ8WYN0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
ATG4AQ8WYN0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms