Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ZSCAN12P1-201ENST00000406489 419 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 FTLP8-201ENST00000446770 267 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC009963.3-201ENST00000458090 486 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 RN7SL174P-201ENST00000475578 289 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC138866.2-201ENST00000508650 584 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC022467.1-201ENST00000614738 749 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC093829.1-201ENST00000506662 1618 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 EEF1A1P14-201ENST00000421195 1376 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RNA5SP65-201ENST00000363166 119 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RN7SKP77-201ENST00000363261 353 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC009237.1-201ENST00000442127 744 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC026348.1-201ENST00000462549 1053 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC090651.1-201ENST00000567865 634 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC005244.1-201ENST00000582566 339 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC018445.2-201ENST00000622987 260 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC022164.1-201ENST00000568767 2673 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC007842.1-201ENST00000597336 2039 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC004815.1-201ENST00000484185 331 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 MTND6P8-201ENST00000503471 522 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC092944.2-201ENST00000605443 889 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 OFD1P10Y-201ENST00000434110 1433 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RNA5SP477-201ENST00000362639 119 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RPL35AP3-201ENST00000414680 288 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC009784.1-201ENST00000426484 460 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 EEF1B2P5-201ENST00000444820 548 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RPS17P15-201ENST00000475609 349 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RPL23AP68-201ENST00000480924 445 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AP002453.1-201ENST00000492327 668 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AL591767.3-201ENST00000554632 525 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 MIR6085-201ENST00000618314 110 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 PFKM-232ENST00000629846 381 ntTSL 4 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AC016745.2-201ENST00000608834 3443 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 CASC19-243ENST00000641588 1546 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RPL31-202ENST00000409000 641 ntTSL 2 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AP006222.1-205ENST00000450734 457 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 SETP20-201ENST00000457046 852 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 RN7SL193P-201ENST00000491708 276 ntBASIC1.86□□□□□ -2.11
SYNE1Q8NF91 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SYNE1Q8NF91 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms