Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC027026.1-201ENST00000532323 742 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AC093283.1-201ENST00000565306 1075 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 RFPL4AP6-201ENST00000616792 846 ntBASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.65□□□□□ -1.18
SMC1BQ8NDV3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.65□□□□□ -1.19
SMC1BQ8NDV3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.19
SMC1BQ8NDV3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC138915.4-201ENST00000565549 4147 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC079753.1-201ENST00000623243 3868 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 RNU6-618P-201ENST00000363518 112 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 MIR620-201ENST00000385232 95 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 FABP12P1-201ENST00000401911 322 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 RN7SKP281-201ENST00000410472 352 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 SFR1P2-201ENST00000421841 730 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC023141.6-201ENST00000429418 337 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 PCBP2P1-201ENST00000437262 977 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 RNF2P1-201ENST00000442955 1010 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC021220.1-201ENST00000507445 630 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 RNA5SP434-201ENST00000516647 121 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 SAA3P-201ENST00000533267 365 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 BNIP3P40-201ENST00000596017 556 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 COX6CP7-201ENST00000597056 208 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AP001823.1-201ENST00000604056 1003 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC111186.1-201ENST00000604684 130 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC079395.2-201ENST00000610982 737 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 MIR6793-201ENST00000612376 63 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC016957.2-201ENST00000616998 848 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AL691477.1-201ENST00000624398 162 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC116667.2-201ENST00000641075 823 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 AC087392.3-202ENST00000358446 1754 ntBASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SMC1BQ8NDV3 MRRFP1-201ENST00000435941 1675 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC007938.1-201ENST00000562524 2902 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AL031651.1-201ENST00000615357 1438 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC005077.1-201ENST00000449226 375 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC002553.3-201ENST00000453002 341 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 AC091685.2-201ENST00000454924 864 ntBASIC7.63□□□□□ -1.19
SMC1BQ8NDV3 GLRXP3-201ENST00000470810 321 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms