Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC003985.2-201ENST00000562268 1669 ntBASIC5.12□□□□□ -1.59
CX3CL1P78423 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CL1P78423 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CX3CL1P78423 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 RNA5SP85-201ENST00000365378 119 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 TMA16P2-201ENST00000413187 601 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 GPN3P1-201ENST00000423883 535 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC083862.1-201ENST00000427378 1242 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 GTF3AP6-201ENST00000432585 986 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 MED28P4-201ENST00000433137 572 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC128677.1-201ENST00000436016 442 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 BX679664.2-201ENST00000439282 283 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 BUD31P2-201ENST00000449374 300 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 EIF2S2P4-201ENST00000461070 984 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 RN7SL393P-201ENST00000463588 296 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC005017.1-201ENST00000482002 490 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.11□□□□□ -1.59
CX3CL1P78423 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.11□□□□□ -1.59
CX3CL1P78423 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC008628.1-201ENST00000508663 265 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 HMGB1P47-201ENST00000511281 589 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 MIR5010-201ENST00000582846 120 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC090616.1-201ENST00000583895 447 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.11□□□□□ -1.59
CX3CL1P78423 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AL355802.4-201ENST00000607635 548 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC068726.1-201ENST00000610993 341 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AL031658.2-201ENST00000616850 651 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 AL138693.1-201ENST00000622219 129 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AP002371.2-201ENST00000624450 503 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC080188.3-201ENST00000624842 748 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CL1P78423 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 RPL31P11-201ENST00000426558 1558 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC130360.2-201ENST00000533477 1556 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC012078.1-201ENST00000405035 1646 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 AC011455.2-201ENST00000599320 3336 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CL1P78423 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 AP000432.2-201ENST00000624164 2048 ntBASIC5.11□□□□□ -1.59
CX3CL1P78423 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CL1P78423 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CL1P78423 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.1□□□□□ -1.59
CX3CL1P78423 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 SNORD35A-201ENST00000363389 86 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 MIR551B-201ENST00000384984 96 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CX3CL1P78423 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 RN7SKP281-201ENST00000410472 352 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 RPS26P38-201ENST00000414476 348 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 MRPS21P5-201ENST00000417885 231 ntBASIC5.1□□□□□ -1.59
CX3CL1P78423 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.1□□□□□ -1.59
CX3CL1P78423 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms