Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.95□□□□□ -1.3
CCNA1P78396 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.95□□□□□ -1.3
CCNA1P78396 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.95□□□□□ -1.3
CCNA1P78396 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.95□□□□□ -1.3
CCNA1P78396 BMS1P10-201ENST00000443754 1120 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 AC008638.1-201ENST00000506035 866 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.95□□□□□ -1.3
CCNA1P78396 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.95□□□□□ -1.3
CCNA1P78396 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.95□□□□□ -1.3
CCNA1P78396 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.95□□□□□ -1.3
CCNA1P78396 AC024255.1-201ENST00000614376 102 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 AC012254.5-201ENST00000623573 478 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCNA1P78396 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCNA1P78396 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 AL359091.1-201ENST00000449048 1734 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.95□□□□□ -1.3
CCNA1P78396 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.95□□□□□ -1.3
CCNA1P78396 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCNA1P78396 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CCNA1P78396 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CCNA1P78396 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCNA1P78396 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.94□□□□□ -1.3
CCNA1P78396 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCNA1P78396 MAPK10-344ENST00000641718 3746 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CCNA1P78396 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.94□□□□□ -1.3
CCNA1P78396 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.94□□□□□ -1.3
CCNA1P78396 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCNA1P78396 FUNDC2P3-201ENST00000334716 533 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.94□□□□□ -1.3
CCNA1P78396 SNRPEP6-201ENST00000407465 277 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 OR3A2-201ENST00000408891 1076 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.94□□□□□ -1.3
CCNA1P78396 CYP4F30P-202ENST00000420048 405 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.94□□□□□ -1.3
CCNA1P78396 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.94□□□□□ -1.3
CCNA1P78396 RN7SL57P-201ENST00000493687 290 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 RNA5SP362-201ENST00000516048 118 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.94□□□□□ -1.3
CCNA1P78396 DPPA3P2-202ENST00000557188 1219 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 AC020765.1-201ENST00000604296 328 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 AL589674.2-201ENST00000604304 337 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.94□□□□□ -1.3
CCNA1P78396 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.94□□□□□ -1.3
CCNA1P78396 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 PDZK1P1-202ENST00000425209 1350 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 AC119674.1-202ENST00000641333 1860 ntBASIC6.94□□□□□ -1.3
CCNA1P78396 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CCNA1P78396 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCNA1P78396 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNA1P78396 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNA1P78396 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNA1P78396 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.93□□□□□ -1.3
CCNA1P78396 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNA1P78396 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNA1P78396 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CCNA1P78396 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CCNA1P78396 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCNA1P78396 RNA5SP375-201ENST00000362975 119 ntBASIC6.93□□□□□ -1.3
CCNA1P78396 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNA1P78396 AL391361.1-201ENST00000405580 489 ntBASIC6.93□□□□□ -1.3
CCNA1P78396 OR2AT2P-201ENST00000413438 905 ntBASIC6.93□□□□□ -1.3
CCNA1P78396 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.93□□□□□ -1.3
CCNA1P78396 BX510359.3-201ENST00000422168 306 ntBASIC6.93□□□□□ -1.3
CCNA1P78396 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNA1P78396 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.93□□□□□ -1.3
CCNA1P78396 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CCNA1P78396 AC126120.1-201ENST00000431082 470 ntBASIC6.93□□□□□ -1.3
CCNA1P78396 SUMO2P3-201ENST00000438311 288 ntBASIC6.93□□□□□ -1.3
CCNA1P78396 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNA1P78396 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNA1P78396 RPS26P39-201ENST00000469206 341 ntBASIC6.93□□□□□ -1.3
CCNA1P78396 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNA1P78396 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.93□□□□□ -1.3
CCNA1P78396 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNA1P78396 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNA1P78396 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNA1P78396 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNA1P78396 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNA1P78396 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNA1P78396 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.93□□□□□ -1.3
CCNA1P78396 AC006530.1-201ENST00000555980 571 ntBASIC6.93□□□□□ -1.3
CCNA1P78396 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.93□□□□□ -1.3
CCNA1P78396 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CCNA1P78396 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.93□□□□□ -1.3
CCNA1P78396 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.93□□□□□ -1.3
CCNA1P78396 AL450226.2-201ENST00000622913 439 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms