Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UBA52P62987 ST13P12-201ENST00000508958 1094 ntBASIC5.31□□□□□ -1.56
UBA52P62987 AC108103.1-201ENST00000511286 446 ntBASIC5.31□□□□□ -1.56
UBA52P62987 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.31□□□□□ -1.56
UBA52P62987 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.31□□□□□ -1.56
UBA52P62987 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 CYCSP25-201ENST00000525280 316 ntBASIC5.31□□□□□ -1.56
UBA52P62987 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 AC133552.4-201ENST00000576103 676 ntBASIC5.31□□□□□ -1.56
UBA52P62987 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.31□□□□□ -1.56
UBA52P62987 AL356986.1-201ENST00000604085 341 ntBASIC5.31□□□□□ -1.56
UBA52P62987 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 AL136097.3-201ENST00000611097 505 ntBASIC5.31□□□□□ -1.56
UBA52P62987 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
UBA52P62987 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 AC022726.2-201ENST00000634673 547 ntBASIC5.31□□□□□ -1.56
UBA52P62987 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 BIN2P1-201ENST00000504996 1530 ntBASIC5.31□□□□□ -1.56
UBA52P62987 GTF2IP4-201ENST00000453092 2054 ntBASIC5.31□□□□□ -1.56
UBA52P62987 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.31□□□□□ -1.56
UBA52P62987 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
UBA52P62987 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBA52P62987 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UBA52P62987 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.3□□□□□ -1.56
UBA52P62987 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
UBA52P62987 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
UBA52P62987 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.3□□□□□ -1.56
UBA52P62987 SNORA70.3-201ENST00000365075 132 ntBASIC5.3□□□□□ -1.56
UBA52P62987 RN7SKP81-201ENST00000365603 331 ntBASIC5.3□□□□□ -1.56
UBA52P62987 GCNT1P4-201ENST00000404096 329 ntBASIC5.3□□□□□ -1.56
UBA52P62987 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.3□□□□□ -1.56
UBA52P62987 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 RPS7P12-201ENST00000422385 582 ntBASIC5.3□□□□□ -1.56
UBA52P62987 AC110602.1-201ENST00000437414 318 ntBASIC5.3□□□□□ -1.56
UBA52P62987 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.3□□□□□ -1.56
UBA52P62987 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.3□□□□□ -1.56
UBA52P62987 AC009879.1-201ENST00000520029 839 ntBASIC5.3□□□□□ -1.56
UBA52P62987 NPIPB14P-203ENST00000532298 987 ntBASIC5.3□□□□□ -1.56
UBA52P62987 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.3□□□□□ -1.56
UBA52P62987 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.3□□□□□ -1.56
UBA52P62987 AC019322.1-201ENST00000571869 389 ntBASIC5.3□□□□□ -1.56
UBA52P62987 AC004232.2-201ENST00000574245 821 ntBASIC5.3□□□□□ -1.56
UBA52P62987 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.3□□□□□ -1.56
UBA52P62987 AC026898.1-201ENST00000586404 571 ntBASIC5.3□□□□□ -1.56
UBA52P62987 AC004805.3-201ENST00000603178 310 ntBASIC5.3□□□□□ -1.56
UBA52P62987 AL365181.4-201ENST00000609800 547 ntBASIC5.3□□□□□ -1.56
UBA52P62987 BX323046.1-201ENST00000610145 535 ntBASIC5.3□□□□□ -1.56
UBA52P62987 MIR6862-1-201ENST00000613016 70 ntBASIC5.3□□□□□ -1.56
UBA52P62987 MIR6862-2-201ENST00000614755 70 ntBASIC5.3□□□□□ -1.56
UBA52P62987 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.3□□□□□ -1.56
UBA52P62987 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.3□□□□□ -1.56
UBA52P62987 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.3□□□□□ -1.56
UBA52P62987 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.3□□□□□ -1.56
UBA52P62987 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.3□□□□□ -1.56
UBA52P62987 AC119674.1-217ENST00000641942 1086 ntBASIC5.3□□□□□ -1.56
UBA52P62987 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.3□□□□□ -1.56
UBA52P62987 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
UBA52P62987 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBA52P62987 AC004158.1-201ENST00000564508 4319 ntBASIC5.29□□□□□ -1.56
UBA52P62987 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UBA52P62987 AC020656.2-201ENST00000613291 5309 ntBASIC5.29□□□□□ -1.56
UBA52P62987 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UBA52P62987 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
UBA52P62987 ADAM24P-201ENST00000398655 2101 ntBASIC5.29□□□□□ -1.56
UBA52P62987 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.29□□□□□ -1.56
UBA52P62987 AC003045.1-201ENST00000398779 713 ntBASIC5.29□□□□□ -1.56
UBA52P62987 SNORA77.2-201ENST00000408571 112 ntBASIC5.29□□□□□ -1.56
UBA52P62987 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.29□□□□□ -1.56
UBA52P62987 UBE2V1P14-201ENST00000415815 558 ntBASIC5.29□□□□□ -1.56
UBA52P62987 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.29□□□□□ -1.56
UBA52P62987 HMGB1P7-201ENST00000450921 612 ntBASIC5.29□□□□□ -1.56
UBA52P62987 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms