Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.12□□□□□ -1.75
RPL39P62891 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPL39P62891 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.11□□□□□ -1.75
RPL39P62891 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.11□□□□□ -1.75
RPL39P62891 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RPL39P62891 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RPL39P62891 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.11□□□□□ -1.75
RPL39P62891 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.11□□□□□ -1.75
RPL39P62891 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RPL39P62891 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RPL39P62891 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RPL39P62891 RPL11P4-201ENST00000332269 436 ntBASIC4.11□□□□□ -1.75
RPL39P62891 RN7SKP78-201ENST00000364711 318 ntBASIC4.11□□□□□ -1.75
RPL39P62891 RNA5SP485-201ENST00000365053 119 ntBASIC4.11□□□□□ -1.75
RPL39P62891 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.11□□□□□ -1.75
RPL39P62891 AK3P5-201ENST00000432033 519 ntBASIC4.11□□□□□ -1.75
RPL39P62891 PSMD10P2-201ENST00000432890 672 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AC009244.1-201ENST00000450566 258 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AC004129.2-201ENST00000457229 287 ntBASIC4.11□□□□□ -1.75
RPL39P62891 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 AC022730.1-201ENST00000473114 568 ntBASIC4.11□□□□□ -1.75
RPL39P62891 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RPL39P62891 MINOS1P4-201ENST00000515470 318 ntBASIC4.11□□□□□ -1.75
RPL39P62891 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPL39P62891 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.11□□□□□ -1.75
RPL39P62891 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.11□□□□□ -1.75
RPL39P62891 NATP-201ENST00000523491 878 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AC135983.3-201ENST00000528049 1226 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.11□□□□□ -1.75
RPL39P62891 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.11□□□□□ -1.75
RPL39P62891 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.11□□□□□ -1.75
RPL39P62891 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.11□□□□□ -1.75
RPL39P62891 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.11□□□□□ -1.75
RPL39P62891 BMS1P16-201ENST00000556075 1147 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AC037479.1-201ENST00000558361 625 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.11□□□□□ -1.75
RPL39P62891 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 AC027216.1-201ENST00000577726 685 ntBASIC4.11□□□□□ -1.75
RPL39P62891 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.11□□□□□ -1.75
RPL39P62891 AP001823.1-201ENST00000604056 1003 ntBASIC4.11□□□□□ -1.75
RPL39P62891 HIRAP1-201ENST00000605318 787 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.11□□□□□ -1.75
RPL39P62891 AC004839.1-201ENST00000610269 501 ntBASIC4.11□□□□□ -1.75
RPL39P62891 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AC096861.1-201ENST00000616652 240 ntBASIC4.11□□□□□ -1.75
RPL39P62891 AL445670.1-201ENST00000618889 801 ntBASIC4.11□□□□□ -1.75
RPL39P62891 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RPL39P62891 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 AL360270.2-201ENST00000562952 5985 ntBASIC4.11□□□□□ -1.75
RPL39P62891 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RPL39P62891 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RPL39P62891 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.11□□□□□ -1.75
RPL39P62891 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPL39P62891 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.11□□□□□ -1.75
RPL39P62891 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RPL39P62891 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RPL39P62891 Y_RNA.209-201ENST00000364156 111 ntBASIC4.1□□□□□ -1.75
RPL39P62891 RN7SKP69-201ENST00000365390 305 ntBASIC4.1□□□□□ -1.75
RPL39P62891 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RPL39P62891 FTH1P26-201ENST00000406512 701 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AL033519.1-201ENST00000407266 307 ntBASIC4.1□□□□□ -1.75
RPL39P62891 SNRPEP6-201ENST00000407465 277 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AL139135.1-201ENST00000412675 209 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AC079809.1-201ENST00000415468 276 ntBASIC4.1□□□□□ -1.75
RPL39P62891 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 RPL12P12-201ENST00000424633 501 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AP003385.1-201ENST00000426387 893 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.1□□□□□ -1.75
RPL39P62891 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RPL39P62891 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.1□□□□□ -1.75
RPL39P62891 NPM1P23-201ENST00000440193 849 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AC097359.1-201ENST00000447946 463 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.1□□□□□ -1.75
RPL39P62891 AC099670.1-201ENST00000455141 783 ntBASIC4.1□□□□□ -1.75
RPL39P62891 RNU1-88P-201ENST00000459274 128 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.1□□□□□ -1.75
RPL39P62891 RNA5SP434-201ENST00000516647 121 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.1□□□□□ -1.75
RPL39P62891 OR4A43P-201ENST00000532938 908 ntBASIC4.1□□□□□ -1.75
RPL39P62891 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms