Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 HSPD1P9-201ENST00000420325 1636 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS1BP61024 MAPK10-349ENST00000641767 3661 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 Z95327.2-201ENST00000414579 1873 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CKS1BP61024 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CKS1BP61024 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CKS1BP61024 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CKS1BP61024 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 RN7SKP1-201ENST00000365525 307 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 VIM2P-201ENST00000402383 1294 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 RANP6-201ENST00000413691 644 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS1BP61024 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 AL136231.1-201ENST00000429407 730 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 TCEA1P3-201ENST00000443005 880 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 ST13P21-201ENST00000453250 1098 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.29□□□□□ -1.72
CKS1BP61024 OSTCP1-201ENST00000455507 450 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 VPS25P1-201ENST00000455691 508 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 RN7SL456P-201ENST00000469290 295 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC099340.1-201ENST00000475247 599 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 RPS16P9-201ENST00000477220 427 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 RN7SL868P-201ENST00000485915 303 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC4.29□□□□□ -1.72
CKS1BP61024 RPL19P11-201ENST00000495944 589 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 B3GNTL1P1-201ENST00000509174 289 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 AC011411.1-201ENST00000509592 876 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS1BP61024 OR52H2P-201ENST00000514607 902 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 OR8Q1P-201ENST00000526467 655 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 AC009120.3-201ENST00000563335 499 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 OR4H6P-201ENST00000563771 921 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC015674.1-201ENST00000578482 267 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS1BP61024 EXOSC3P2-201ENST00000594464 497 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS1BP61024 MIR6762-201ENST00000613340 86 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AL355480.4-201ENST00000626823 69 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC135068.11-201ENST00000636378 921 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 AC120338.1-201ENST00000625074 1541 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS1BP61024 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
CKS1BP61024 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS1BP61024 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CKS1BP61024 RBPJP6-201ENST00000411556 1431 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 EEF1A1P28-201ENST00000450915 1403 ntBASIC4.29□□□□□ -1.72
CKS1BP61024 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.29□□□□□ -1.72
CKS1BP61024 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CKS1BP61024 LINC01963-201ENST00000562038 3148 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC092376.2-201ENST00000622621 4116 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AP001642.1-201ENST00000624727 2117 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.28□□□□□ -1.72
CKS1BP61024 CCNT2P1-201ENST00000423082 1315 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 NEK2P2-201ENST00000438441 1338 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS1BP61024 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CKS1BP61024 RNA5SP355-201ENST00000365317 135 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AL672167.2-201ENST00000377164 879 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 MIR99A-201ENST00000384906 81 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.28□□□□□ -1.72
CKS1BP61024 RNU2-5P-201ENST00000410533 180 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 RN7SKP137-201ENST00000411074 307 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 CTSL3P-202ENST00000412179 788 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 RPL12P10-201ENST00000413498 498 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS1BP61024 AL359633.1-201ENST00000421403 310 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 RPL23AP85-201ENST00000421838 433 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC000089.1-201ENST00000424559 801 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC009237.1-201ENST00000442127 744 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms