Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN6P56747 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN6P56747 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 AC008536.1-201ENST00000602872 669 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 AL589674.2-201ENST00000604304 337 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 MIR193BHG-214ENST00000641765 509 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CLDN6P56747 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.89□□□□□ -1.47
CLDN6P56747 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN6P56747 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CLDN6P56747 AC005618.1-201ENST00000606901 3148 ntBASIC5.89□□□□□ -1.47
CLDN6P56747 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN6P56747 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CLDN6P56747 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
CLDN6P56747 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 GUCY1B2-204ENST00000531898 1979 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 RNA5SP375-201ENST00000362975 119 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN6P56747 OR3A2-201ENST00000408891 1076 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 AL139415.1-201ENST00000424862 352 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 AL139156.3-201ENST00000454802 394 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 RANP2-201ENST00000456833 229 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN6P56747 RN7SL269P-201ENST00000467795 305 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 RN7SL799P-201ENST00000475891 298 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 RPL32P9-201ENST00000487963 407 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN6P56747 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 SNORA26.10-201ENST00000516427 141 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 PCNAP4-201ENST00000532690 730 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 AL121579.2-201ENST00000555466 590 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN6P56747 AC090651.1-201ENST00000567865 634 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN6P56747 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.88□□□□□ -1.47
CLDN6P56747 AC015802.2-201ENST00000589690 189 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 OR7A11P-201ENST00000597719 953 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AL645933.2-201ENST00000606743 1207 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AL035661.1-201ENST00000620459 1144 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 AC116667.2-201ENST00000641075 823 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 OR7A1P-202ENST00000641542 1158 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 OLMALINC-203ENST00000641087 3779 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 AP002370.1-201ENST00000528055 1602 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN6P56747 AC062022.1-201ENST00000451026 1684 ntBASIC5.88□□□□□ -1.47
CLDN6P56747 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN6P56747 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN6P56747 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN6P56747 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN6P56747 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN6P56747 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN6P56747 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN6P56747 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.87□□□□□ -1.47
CLDN6P56747 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN6P56747 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.87□□□□□ -1.47
CLDN6P56747 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLDN6P56747 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN6P56747 RN7SKP160-201ENST00000363804 340 ntBASIC5.87□□□□□ -1.47
CLDN6P56747 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms