Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 AC092451.3-201ENST00000625067 1343 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 CASC19-281ENST00000642118 1554 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.02□□□□□ -1.45
SUMO3P55854 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 CASC19-228ENST00000641414 1684 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 RNA5SP350-201ENST00000363298 111 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 SNORD56.4-201ENST00000363883 71 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 RNU6-1005P-201ENST00000384519 107 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 UBE2V1P11-201ENST00000411559 285 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 CYCSP52-201ENST00000422857 310 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.02□□□□□ -1.45
SUMO3P55854 RPL31P11-202ENST00000454082 372 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 RN7SL70P-201ENST00000478322 302 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AC131392.1-201ENST00000506490 633 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.02□□□□□ -1.45
SUMO3P55854 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 SCARNA5-201ENST00000516201 276 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AC073581.1-201ENST00000519036 575 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC008429.2-201ENST00000523057 864 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 CASP1P2-201ENST00000526830 1258 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC005519.1-201ENST00000554490 601 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC245052.7-201ENST00000601161 359 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AL606834.3-201ENST00000602615 496 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AC012065.3-201ENST00000602736 439 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 BUB1P1-201ENST00000603541 607 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 RMST_10.1-201ENST00000616309 154 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.02□□□□□ -1.45
SUMO3P55854 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 AC097520.1-201ENST00000624435 385 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 SNX18P10-201ENST00000625014 519 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.02□□□□□ -1.45
SUMO3P55854 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 AP002370.1-201ENST00000528055 1602 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SUMO3P55854 SMG1P5-202ENST00000529428 4219 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 SMG1P2-201ENST00000566127 4221 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.02□□□□□ -1.45
SUMO3P55854 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.02□□□□□ -1.45
SUMO3P55854 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 CYP2G2P-201ENST00000594920 1485 ntBASIC6.02□□□□□ -1.45
SUMO3P55854 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SUMO3P55854 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.01□□□□□ -1.45
SUMO3P55854 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SUMO3P55854 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 PARP4P1-201ENST00000435945 2337 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.01□□□□□ -1.45
SUMO3P55854 UGT2B27P-201ENST00000505092 1620 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SUMO3P55854 RNA5SP333-201ENST00000363466 118 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 RNU5B-4P-201ENST00000363508 111 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 RNU4-7P-201ENST00000364758 141 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 RNA5SP334-201ENST00000364825 118 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AC092634.1-201ENST00000366505 199 ntBASIC6.01□□□□□ -1.45
SUMO3P55854 AL023284.3-201ENST00000407767 334 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms