Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.67□□□□□ -1.34
NEK3P51956 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 PROS2P-201ENST00000474651 1951 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AC009779.8-201ENST00000641684 4384 ntBASIC6.66□□□□□ -1.34
NEK3P51956 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 AC006213.6-201ENST00000623722 4179 ntBASIC6.66□□□□□ -1.34
NEK3P51956 RAD1P1-201ENST00000231383 813 ntBASIC6.66□□□□□ -1.34
NEK3P51956 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 RN7SKP250-201ENST00000363924 321 ntBASIC6.66□□□□□ -1.34
NEK3P51956 RNU6-609P-201ENST00000365459 107 ntBASIC6.66□□□□□ -1.34
NEK3P51956 RNU6-1263P-201ENST00000384601 106 ntBASIC6.66□□□□□ -1.34
NEK3P51956 RNA5SP251-201ENST00000410614 137 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.66□□□□□ -1.34
NEK3P51956 AL139184.1-202ENST00000422303 222 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AC007568.1-201ENST00000422912 471 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.66□□□□□ -1.34
NEK3P51956 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 LINC00328-2P-201ENST00000436585 219 ntBASIC6.66□□□□□ -1.34
NEK3P51956 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 AC093166.3-201ENST00000448785 303 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 RN7SL568P-201ENST00000493069 298 ntBASIC6.66□□□□□ -1.34
NEK3P51956 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.66□□□□□ -1.34
NEK3P51956 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 NPM1P27-201ENST00000502784 830 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.66□□□□□ -1.34
NEK3P51956 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.66□□□□□ -1.34
NEK3P51956 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.66□□□□□ -1.34
NEK3P51956 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.66□□□□□ -1.34
NEK3P51956 AC124891.1-201ENST00000536322 519 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.66□□□□□ -1.34
NEK3P51956 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 AC026956.1-201ENST00000558741 396 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.66□□□□□ -1.34
NEK3P51956 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 MT1CP-201ENST00000567054 174 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.66□□□□□ -1.34
NEK3P51956 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 AC004775.1-201ENST00000607389 753 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AC009779.8-202ENST00000607990 932 ntBASIC6.66□□□□□ -1.34
NEK3P51956 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 AL352984.2-201ENST00000611153 546 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AC020978.9-201ENST00000624380 1141 ntBASIC6.66□□□□□ -1.34
NEK3P51956 AL138960.2-201ENST00000625145 535 ntBASIC6.66□□□□□ -1.34
NEK3P51956 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NEK3P51956 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NEK3P51956 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.66□□□□□ -1.34
NEK3P51956 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NEK3P51956 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NEK3P51956 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NEK3P51956 AL359715.3-201ENST00000569267 2123 ntBASIC6.65□□□□□ -1.34
NEK3P51956 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.65□□□□□ -1.34
NEK3P51956 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.65□□□□□ -1.34
NEK3P51956 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.65□□□□□ -1.34
NEK3P51956 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.65□□□□□ -1.34
NEK3P51956 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NEK3P51956 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NEK3P51956 HSPD1P7-201ENST00000447985 1686 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AC062022.1-201ENST00000451026 1684 ntBASIC6.65□□□□□ -1.34
NEK3P51956 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NEK3P51956 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NEK3P51956 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NEK3P51956 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
NEK3P51956 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
NEK3P51956 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.65□□□□□ -1.34
NEK3P51956 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
NEK3P51956 MRPS6P2-201ENST00000381143 370 ntBASIC6.65□□□□□ -1.34
NEK3P51956 AL049697.3-201ENST00000406493 982 ntBASIC6.65□□□□□ -1.34
NEK3P51956 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.65□□□□□ -1.34
NEK3P51956 RN7SKP129-201ENST00000410288 299 ntBASIC6.65□□□□□ -1.34
NEK3P51956 RPL26P37-201ENST00000411983 438 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms